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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G47490   RGPR-like protein 
 ath-u.5   AT5G47490   RGPR-like protein 
 ath-r.7   AT5G47490   RGPR-like protein 
 ath-m.9   AT5G47490   RGPR-like protein 
 ath-e.2   AT5G47490   RGPR-like protein 
 ath-m.4.bio   AT5G47490   RGPR-like protein 
 ath-m.4.lig   AT5G47490   RGPR-like protein 
 ath-m.4.str   AT5G47490   RGPR-like protein 
 ath-m.4.tis   AT5G47490   RGPR-like protein 
 ath-u.5   AT5G47480   RGPR-like protein 
 bra-r.6   103827645   protein transport protein SEC16B homolog 
 bra-r.6   103839525   protein transport protein SEC16A homolog 
 bra-r.6   117125656   protein transport protein SEC16A homolog 
 bna-r.1   106432051   protein transport protein SEC16A homolog 
 bna-r.1   106432050   protein transport protein SEC16A homolog 
 bna-r.1   106417589   protein transport protein SEC16A homolog 
 ghi-r.1   107934089   protein transport protein SEC16B homolog 
 ghi-r.1   107952764   protein transport protein SEC16A homolog 
 ghi-r.1   107954563   protein transport protein SEC16A homolog 
 cit-r.1   102631242   protein transport protein SEC16B homolog 
 gma-u.5   100795053   protein transport protein SEC16B homolog 
 gma-u.5   100795588   protein transport protein SEC16B homolog 
 gma-u.5   100810562   protein transport protein SEC16B homolog 
 vvi-u.5   100255037   protein transport protein SEC16A homolog 
 vvi-u.5   100251258   protein transport protein SEC16B homolog 
 ppo-u.5   7471626   protein transport protein SEC16B homolog 
 ppo-u.5   18094624   protein transport protein SEC16B homolog 
 mtr-u.5   11410675   protein transport protein SEC16B homolog 
 mtr-u.5   11428965   protein transport protein SEC16A homolog 
 sly-u.5   101257490   protein transport protein SEC16B homolog 
 sly-u.5   101258084   protein transport protein SEC16B homolog 
 sot-r.1   107062051   protein transport protein SEC16B homolog 
 sot-r.1   102579779   protein transport protein SEC16B homolog 
 sot-r.1   102600292   protein transport protein SEC16B homolog 
 nta-r.1   107787569   protein transport protein SEC16B homolog 
 nta-r.1   107765157   protein transport protein SEC16A homolog 
 nta-r.1   107805553   protein transport protein SEC16B homolog 
 osa-u.5   4339861   protein transport protein SEC16A homolog 
 osa-u.5   4328009   protein transport protein SEC16A homolog 
 zma-u.5   100383190   uncharacterized LOC100383190 
 zma-u.5   100383255   uncharacterized LOC100383255 
 tae-r.2   123131645   protein transport protein SEC16A homolog 
 tae-r.2   123088558   protein transport protein SEC16A homolog 
 tae-r.2   123143022   protein transport protein SEC16A homolog 
 hvu-r.1   123407273   protein transport protein SEC16A homolog 
 hvu-r.1   123404795   protein transport protein SEC16B homolog 
 sbi-r.1   8085168   protein transport protein SEC16A homolog 
 sbi-r.1   8067888   protein transport protein SEC16A homolog 
 bdi-r.1   100842042   protein transport protein SEC16B homolog 
 bdi-r.1   100839880   protein transport protein SEC16A homolog 
 cre-r.1   CHLRE_01g008850v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G47490 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G47490 (ath-m.4.hor coexpression data)

CoexMap"834799"


athAT5G47490 | Entrez gene ID : 834799      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 3 2 2 2 2 3 3 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001318753.1 [sequence] [blastp]
NP_001330152.1 [sequence] [blastp]
NP_199560.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001318753.1)
nucl 9  (predict for NP_001330152.1)
nucl 9  (predict for NP_199560.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001318753.1)
other 8  (predict for NP_001330152.1)
other 8  (predict for NP_199560.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G47490
ath-u.5
for
AT5G47490
ath-r.7
for
AT5G47490
ath-m.9
for
AT5G47490
ath-e.2
for
AT5G47490
ath-m.4.bio
for
AT5G47490
ath-m.4.lig
for
AT5G47490
ath-m.4.str
for
AT5G47490
ath-m.4.tis
for
AT5G47490
ath-u.5
for
AT5G47480
bra-r.6
for
103827645
bra-r.6
for
103839525
bra-r.6
for
117125656
bna-r.1
for
106432051
bna-r.1
for
106432050
bna-r.1
for
106417589
ghi-r.1
for
107934089
ghi-r.1
for
107952764
ghi-r.1
for
107954563
cit-r.1
for
102631242
gma-u.5
for
100795053
gma-u.5
for
100795588
gma-u.5
for
100810562
vvi-u.5
for
100255037
vvi-u.5
for
100251258
ppo-u.5
for
7471626
ppo-u.5
for
18094624
mtr-u.5
for
11410675
mtr-u.5
for
11428965
sly-u.5
for
101257490
sly-u.5
for
101258084
sot-r.1
for
107062051
sot-r.1
for
102579779
sot-r.1
for
102600292
nta-r.1
for
107787569
nta-r.1
for
107765157
nta-r.1
for
107805553
osa-u.5
for
4339861
osa-u.5
for
4328009
zma-u.5
for
100383190
zma-u.5
for
100383255
tae-r.2
for
123131645
tae-r.2
for
123088558
tae-r.2
for
123143022
hvu-r.1
for
123407273
hvu-r.1
for
123404795
sbi-r.1
for
8085168
sbi-r.1
for
8067888
bdi-r.1
for
100842042
bdi-r.1
for
100839880
cre-r.1
for
CHLRE_01g008850v5


Ortholog ID: 2942
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT5G47490 AT5G47480 LOC103827645 LOC103839525 LOC117125656 LOC106432051 LOC106432050 LOC106417588 LOC107952764 LOC121223538 LOC107929372 LOC102631242 LOC100795053 LOC100810562 LOC100811102 LOC100255037 LOC100251258 LOC7471626 LOC18094624 LOC11410675 LOC11428965 LOC101257490 LOC101258084 LOC107062051 LOC102579779 LOC102600292 LOC107787569 LOC107765157 LOC107805553 LOC4339861 LOC4328009 LOC100383190 LOC100383255 LOC123143022 LOC123150363 LOC123166081 LOC123407273 LOC123404795 LOC8085168 LOC8067888 LOC100842042 LOC100839880 CHLRE_01g008850v5
Function* RGPR-like protein RGPR-like protein protein transport protein SEC16B homolog protein transport protein SEC16A homolog protein transport protein SEC16A homolog protein transport protein SEC16A homolog protein transport protein SEC16A homolog protein transport protein SEC16A homolog protein transport protein SEC16A homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16A homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16A homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16B homolog protein transport protein SEC16A homolog protein transport protein SEC16B homolog protein transport protein SEC16A homolog protein transport protein SEC16A homolog uncharacterized LOC100383190 uncharacterized LOC100383255 protein transport protein SEC16A homolog protein transport protein SEC16A homolog protein transport protein SEC16B homolog protein transport protein SEC16A homolog protein transport protein SEC16B homolog protein transport protein SEC16A homolog protein transport protein SEC16A homolog protein transport protein SEC16B homolog protein transport protein SEC16A homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04382 Cornified envelope formation 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834799 834798 103827645 103839525 117125656 106432051 106432050 106417588 107952764 121223538 107929372 102631242 100795053 100810562 100811102 100255037 100251258 7471626 18094624 11410675 11428965 101257490 101258084 107062051 102579779 102600292 107787569 107765157 107805553 4339861 4328009 100383190 100383255 123143022 123150363 123166081 123407273 123404795 8085168 8067888 100842042 100839880 66051959
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