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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-u.5   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-r.7   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.9   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-e.2   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.bio   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.lig   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.str   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.tis   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 bra-r.6   103851906   splicing factor, suppressor of white-apricot homolog 
 bna-r.1   106390010   splicing factor, suppressor of white-apricot homolog 
 bna-r.1   125581532   splicing factor, suppressor of white-apricot homolog 
 ghi-r.1   107903459   splicing factor, suppressor of white-apricot homolog 
 ghi-r.1   107932757   protein suppressor of white apricot 
 cit-r.1   102619096   uncharacterized LOC102619096 
 gma-u.5   100801276   splicing factor, suppressor of white-apricot homolog 
 gma-u.5   100791165   splicing factor, suppressor of white-apricot homolog 
 vvi-u.5   100250252   uncharacterized LOC100250252 
 ppo-u.5   7478709   uncharacterized LOC7478709 
 mtr-u.5   11425876   protein suppressor of white apricot 
 sly-u.5   101250744   uncharacterized LOC101250744 
 sot-r.1   102593692   splicing factor, suppressor of white-apricot homolog 
 nta-r.1   107786983   uncharacterized LOC107786983 
 nta-r.1   142182631   uncharacterized LOC142182631 
 osa-u.5   4325296   uncharacterized LOC4325296 
 zma-u.5   100383427   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 tae-r.2   123061788   NKAP family protein UM04995 
 tae-r.2   123078888   splicing factor, suppressor of white-apricot homolog 
 tae-r.2   123070467   uncharacterized LOC123070467 
 hvu-r.1   123444207   splicing factor, suppressor of white-apricot homolog 
 sbi-r.1   8068064   splicing factor, suppressor of white-apricot homolog 
 bdi-r.1   100831732   uncharacterized LOC100831732 
 cre-r.1   CHLRE_11g481700v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G55100 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G55100 (ath-m.4.hor coexpression data)

CoexMap"835601"


athAT5G55100 | Entrez gene ID : 835601      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (588 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_001331565.1 [sequence] [blastp]
NP_001331566.1 [sequence] [blastp]
NP_001331567.1 [sequence] [blastp]
NP_001331568.1 [sequence] [blastp]
NP_001331569.1 [sequence] [blastp]
NP_001331570.1 [sequence] [blastp]
NP_001331571.1 [sequence] [blastp]
NP_001331572.1 [sequence] [blastp]
NP_001331573.1 [sequence] [blastp]
NP_001331574.1 [sequence] [blastp]
NP_568820.1 [sequence] [blastp]
NP_851194.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001331565.1)
nucl 10  (predict for NP_001331566.1)
nucl 10  (predict for NP_001331567.1)
nucl 10  (predict for NP_001331568.1)
nucl 10  (predict for NP_001331569.1)
nucl 10  (predict for NP_001331570.1)
nucl 10  (predict for NP_001331571.1)
nucl 10  (predict for NP_001331572.1)
nucl 10  (predict for NP_001331573.1)
nucl 10  (predict for NP_001331574.1)
nucl 10  (predict for NP_568820.1)
nucl 10  (predict for NP_851194.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331565.1)
other 8  (predict for NP_001331566.1)
other 8  (predict for NP_001331567.1)
other 8  (predict for NP_001331568.1)
other 8  (predict for NP_001331569.1)
other 8  (predict for NP_001331570.1)
other 8  (predict for NP_001331571.1)
other 8  (predict for NP_001331572.1)
other 8  (predict for NP_001331573.1)
other 8  (predict for NP_001331574.1)
other 6  (predict for NP_568820.1)
other 6  (predict for NP_851194.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G55100
ath-u.5
for
AT5G55100
ath-r.7
for
AT5G55100
ath-m.9
for
AT5G55100
ath-e.2
for
AT5G55100
ath-m.4.bio
for
AT5G55100
ath-m.4.lig
for
AT5G55100
ath-m.4.str
for
AT5G55100
ath-m.4.tis
for
AT5G55100
bra-r.6
for
103851906
bna-r.1
for
106390010
bna-r.1
for
125581532
ghi-r.1
for
107903459
ghi-r.1
for
107932757
cit-r.1
for
102619096
gma-u.5
for
100801276
gma-u.5
for
100791165
vvi-u.5
for
100250252
ppo-u.5
for
7478709
mtr-u.5
for
11425876
sly-u.5
for
101250744
sot-r.1
for
102593692
nta-r.1
for
107786983
nta-r.1
for
142182631
osa-u.5
for
4325296
zma-u.5
for
100383427
tae-r.2
for
123061788
tae-r.2
for
123078888
tae-r.2
for
123070467
hvu-r.1
for
123444207
sbi-r.1
for
8068064
bdi-r.1
for
100831732
cre-r.1
for
CHLRE_11g481700v5


Ortholog ID: 10398
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G55100 LOC103851906 LOC106390010 LOC125581532 LOC107903459 LOC107932757 LOC102619096 LOC100801276 LOC100791165 LOC100250252 LOC7478709 LOC11425876 LOC101250744 LOC102593692 LOC107786983 LOC142182631 LOC4325296 LOC100383427 LOC123061788 LOC123078888 LOC123070467 LOC123444207 LOC8068064 LOC100831732 CHLRE_11g481700v5
Function* SWAP (Suppressor-of-White-APricot)/surp domain-containing protein splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog protein suppressor of white apricot uncharacterized LOC102619096 splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog uncharacterized LOC100250252 uncharacterized LOC7478709 protein suppressor of white apricot uncharacterized LOC101250744 splicing factor, suppressor of white-apricot homolog uncharacterized LOC107786983 uncharacterized LOC142182631 uncharacterized LOC4325296 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein NKAP family protein UM04995 splicing factor, suppressor of white-apricot homolog uncharacterized LOC123070467 splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog uncharacterized LOC100831732 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 5
bna04070 Phosphatidylinositol signaling system 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835601 103851906 106390010 125581532 107903459 107932757 102619096 100801276 100791165 100250252 7478709 11425876 101250744 102593692 107786983 142182631 4325296 100383427 123061788 123078888 123070467 123444207 8068064 100831732 5722947
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