ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.hor	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
ath-u.5	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
ath-r.7	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
ath-m.9	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
ath-e.2	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
ath-m.4.bio	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
ath-m.4.lig	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
ath-m.4.str	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
ath-m.4.tis	AT5G57340	ras guanine nucleotide exchange factor Q-like protein
bra-r.6	103851717	myb-like protein D
bna-r.1	106418015	myb-like protein D
ghi-r.1	107926148	uncharacterized LOC107926148
ghi-r.1	107923159	uncharacterized LOC107923159
ghi-r.1	107918908	uncharacterized LOC107918908
cit-r.1	102617180	uncharacterized LOC102617180
gma-u.5	100806898	uncharacterized LOC100806898
gma-u.5	100808018	uncharacterized LOC100808018
gma-u.5	100500633	uncharacterized LOC100500633
ppo-u.5	7461574	uncharacterized LOC7461574
ppo-u.5	18100474	uncharacterized LOC18100474
mtr-u.5	11445388	uncharacterized LOC11445388
mtr-u.5	11428346	uncharacterized LOC11428346
nta-r.1	107777030	uncharacterized LOC107777030

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_568853.1 [sequence] [blastp]
NP_974951.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5	(predict for NP_568853.1)
nucl 9	(predict for NP_974951.1)

Subcellular
localization
TargetP

other 8	(predict for NP_568853.1)
other 6	(predict for NP_974951.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.hor for AT5G57340	ath-u.5 for AT5G57340	ath-r.7 for AT5G57340	ath-m.9 for AT5G57340	ath-e.2 for AT5G57340	ath-m.4.bio for AT5G57340	ath-m.4.lig for AT5G57340	ath-m.4.str for AT5G57340	ath-m.4.tis for AT5G57340	bra-r.6 for 103851717	bna-r.1 for 106418015	ghi-r.1 for 107926148	ghi-r.1 for 107923159	ghi-r.1 for 107918908	cit-r.1 for 102617180	gma-u.5 for 100806898	gma-u.5 for 100808018	gma-u.5 for 100500633	ppo-u.5 for 7461574	ppo-u.5 for 18100474	mtr-u.5 for 11445388	mtr-u.5 for 11428346	nta-r.1 for 107777030

Ortholog

Ortholog ID: 9743

Species

ath

bra

bna

ghi

cit

gma

ppo

mtr

nta

Symbol

Function^*

ras guanine nucleotide exchange factor Q-like protein

myb-like protein D

uncharacterized LOC107926148

uncharacterized LOC107918908

uncharacterized LOC107907356

uncharacterized LOC102617180

uncharacterized LOC100808018

uncharacterized LOC7461574

uncharacterized LOC18100474

uncharacterized LOC11445388

uncharacterized LOC11428346

uncharacterized LOC107777030

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00760	Nicotinate and nicotinamide metabolism	2
nta00730	Thiamine metabolism	2
nta00740	Riboflavin metabolism	2
nta01240	Biosynthesis of cofactors	2
nta04016	MAPK signaling pathway - plant	2