ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.hor	AT5G59700	Protein kinase superfamily protein
ath-u.5	AT5G59700	Protein kinase superfamily protein
ath-r.7	AT5G59700	Protein kinase superfamily protein
ath-m.9	AT5G59700	Protein kinase superfamily protein
ath-e.2	AT5G59700	Protein kinase superfamily protein
ath-m.4.bio	AT5G59700	Protein kinase superfamily protein
ath-m.4.lig	AT5G59700	Protein kinase superfamily protein
ath-m.4.str	AT5G59700	Protein kinase superfamily protein
ath-m.4.tis	AT5G59700	Protein kinase superfamily protein
ath-u.5	HERK1	hercules receptor kinase 1
bra-r.6	103873622	receptor-like protein kinase HERK 1
bra-r.6	103845390	probable receptor-like protein kinase At5g59700
bna-r.1	111204396	receptor-like protein kinase HERK 1
bna-r.1	106407757	receptor-like protein kinase HERK 1
bna-r.1	106406076	receptor-like protein kinase HERK 1
ghi-r.1	107932930	receptor-like protein kinase HERK 1
ghi-r.1	107950296	receptor-like protein kinase HERK 1
ghi-r.1	107940812	probable receptor-like protein kinase At5g59700
cit-r.1	102614958	receptor-like protein kinase HERK 1
cit-r.1	102615450	probable receptor-like protein kinase At5g59700
gma-u.5	100305414	protein kinase
gma-u.5	100778698	receptor-like protein kinase HERK 1
gma-u.5	100806488	receptor-like protein kinase HERK 1
vvi-u.5	100265586	probable receptor-like protein kinase At5g59700
vvi-u.5	100251868	receptor-like protein kinase HERK 1
ppo-u.5	7489281	receptor-like protein kinase HERK 1
ppo-u.5	7485732	receptor-like protein kinase HERK 1
ppo-u.5	7489609	probable receptor-like protein kinase At5g59700
mtr-u.5	11417590	receptor-like protein kinase HERK 1
mtr-u.5	11408742	receptor-like protein kinase HERK 1
sly-u.5	101258128	receptor-like protein kinase HERK 1
sly-u.5	101255400	receptor-like protein kinase HERK 1
sly-u.5	101248487	receptor-like protein kinase HERK 1
sot-r.1	102596871	receptor-like protein kinase HERK 1
sot-r.1	102606389	receptor-like protein kinase HERK 1
sot-r.1	102604283	receptor-like protein kinase HERK 1
nta-r.1	107758937	receptor-like protein kinase HERK 1
nta-r.1	107771309	receptor-like protein kinase HERK 1
nta-r.1	107790946	receptor-like protein kinase HERK 1
osa-u.5	4337896	receptor-like protein kinase HERK 1
osa-u.5	4340933	receptor-like protein kinase HERK 1
zma-u.5	100384323	uncharacterized LOC100384323
zma-u.5	100193715	Putative receptor-like protein kinase family protein
tae-r.2	123113944	receptor-like protein kinase HERK 1
tae-r.2	123039254	receptor-like protein kinase HERK 1
tae-r.2	123147844	receptor-like protein kinase HERK 1
hvu-r.1	123426354	receptor-like protein kinase HERK 1
hvu-r.1	123413286	receptor-like protein kinase HERK 1
sbi-r.1	8058434	receptor-like protein kinase HERK 1
sbi-r.1	8071202	receptor-like protein kinase HERK 1
bdi-r.1	100838088	receptor-like protein kinase HERK 1
bdi-r.1	100839805	receptor-like protein kinase HERK 1

Top 50 coexpressed genes to AT5G59700 (ath-m.4.hor coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G59700 (ath-m.4.hor coexpression data)

CoexMap"836091"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0010483 [list] [network] pollen tube reception	(11 genes)	IGI
GO:0010183 [list] [network] pollen tube guidance	(50 genes)	IMP

GO CC

GO:0043680 [list] [network] filiform apparatus	(6 genes)	IDA
GO:0009506 [list] [network] plasmodesma	(874 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2598 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3158 genes)	ISM

GO MF

GO:0016301 [list] [network] kinase activity	(1055 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_200778.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, mito 1, vacu 1, E.R. 1, golg 1, E.R._vacu 1

(predict for NP_200778.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_200778.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.hor for AT5G59700	ath-u.5 for AT5G59700	ath-r.7 for AT5G59700	ath-m.9 for AT5G59700	ath-e.2 for AT5G59700	ath-m.4.bio for AT5G59700	ath-m.4.lig for AT5G59700	ath-m.4.str for AT5G59700	ath-m.4.tis for AT5G59700	ath-u.5 for HERK1	bra-r.6 for 103873622	bra-r.6 for 103845390	bna-r.1 for 111204396	bna-r.1 for 106407757	bna-r.1 for 106406076	ghi-r.1 for 107932930	ghi-r.1 for 107950296	ghi-r.1 for 107940812	cit-r.1 for 102614958	cit-r.1 for 102615450	gma-u.5 for 100305414	gma-u.5 for 100778698	gma-u.5 for 100806488	vvi-u.5 for 100265586	vvi-u.5 for 100251868	ppo-u.5 for 7489281	ppo-u.5 for 7485732	ppo-u.5 for 7489609	mtr-u.5 for 11417590	mtr-u.5 for 11408742	sly-u.5 for 101258128	sly-u.5 for 101255400	sly-u.5 for 101248487	sot-r.1 for 102596871	sot-r.1 for 102606389	sot-r.1 for 102604283	nta-r.1 for 107758937	nta-r.1 for 107771309	nta-r.1 for 107790946	osa-u.5 for 4337896	osa-u.5 for 4340933	zma-u.5 for 100384323	zma-u.5 for 100193715	tae-r.2 for 123113944	tae-r.2 for 123039254	tae-r.2 for 123147844	hvu-r.1 for 123426354	hvu-r.1 for 123413286	sbi-r.1 for 8058434	sbi-r.1 for 8071202	bdi-r.1 for 100838088	bdi-r.1 for 100839805

Ortholog

Ortholog ID: 2417

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

HERK1

Function^*

Protein kinase superfamily protein

hercules receptor kinase 1