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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 ath-u.5   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 ath-r.7   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 ath-m.9   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 ath-e.2   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 ath-m.4.bio   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 ath-m.4.lig   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 ath-m.4.str   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 ath-m.4.tis   DIM1B   Ribosomal RNA adenine dimethylase family protein 
 bra-r.6   103829618   ribosomal RNA small subunit methyltransferase, mitochondrial 
 ghi-r.1   107909429   ribosomal RNA small subunit methyltransferase, mitochondrial 
 ghi-r.1   107936557   ribosomal RNA small subunit methyltransferase, mitochondrial 
 cit-r.1   102624070   ribosomal RNA small subunit methyltransferase, mitochondrial 
 gma-u.5   100813522   ribosomal RNA small subunit methyltransferase, mitochondrial 
 gma-u.5   100790908   ribosomal RNA small subunit methyltransferase, mitochondrial 
 vvi-u.5   100247089   ribosomal RNA small subunit methyltransferase, mitochondrial 
 ppo-u.5   7465423   ribosomal RNA small subunit methyltransferase, mitochondrial 
 mtr-u.5   11405665   ribosomal RNA small subunit methyltransferase, mitochondrial 
 sly-u.5   101260604   ribosomal RNA small subunit methyltransferase, mitochondrial 
 sot-r.1   102598434   ribosomal RNA small subunit methyltransferase, mitochondrial 
 nta-r.1   107795324   ribosomal RNA small subunit methyltransferase, mitochondrial-like 
 nta-r.1   107771929   ribosomal RNA small subunit methyltransferase, mitochondrial-like 
 osa-u.5   4343346   ribosomal RNA small subunit methyltransferase, mitochondrial 
 zma-u.5   100192593   uncharacterized LOC100192593 
 bdi-r.1   100828870   ribosomal RNA small subunit methyltransferase, mitochondrial 

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Top 50 coexpressed genes to DIM1B (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DIM1B (ath-m.4.hor coexpression data)

CoexMap"836768"


athDIM1B | Entrez gene ID : 836768      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta osa zma bdi tae bna cre sbi hvu
Paralog 9 1 2 1 2 1 1 1 1 1 2 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0046085 [list] [network] adenosine metabolic process  (4 genes)  IMP  
GO:0000154 [list] [network] rRNA modification  (83 genes)  IGI  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000179 [list] [network] rRNA (adenine-N6,N6-)-dimethyltransferase activity  (2 genes)  IGI  
Protein NP_201437.2 [sequence] [blastp]
NP_975003.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_201437.2)
chlo 3,  nucl 2,  cyto 2,  cyto_nucl 2,  mito 1  (predict for NP_975003.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_201437.2)
mito 6  (predict for NP_975003.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
DIM1B
ath-u.5
for
DIM1B
ath-r.7
for
DIM1B
ath-m.9
for
DIM1B
ath-e.2
for
DIM1B
ath-m.4.bio
for
DIM1B
ath-m.4.lig
for
DIM1B
ath-m.4.str
for
DIM1B
ath-m.4.tis
for
DIM1B
bra-r.6
for
103829618
ghi-r.1
for
107909429
ghi-r.1
for
107936557
cit-r.1
for
102624070
gma-u.5
for
100813522
gma-u.5
for
100790908
vvi-u.5
for
100247089
ppo-u.5
for
7465423
mtr-u.5
for
11405665
sly-u.5
for
101260604
sot-r.1
for
102598434
nta-r.1
for
107795324
nta-r.1
for
107771929
osa-u.5
for
4343346
zma-u.5
for
100192593
bdi-r.1
for
100828870


Ortholog ID: 10423
Species ath bra ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma bdi
Symbol DIM1B LOC103829618 LOC107909429 LOC107936557 LOC102624070 LOC100813522 LOC100790908 LOC100247089 LOC7465423 LOC11405665 LOC101260604 LOC102598434 LOC107795324 LOC107771929 LOC4343346 LOC100192593 LOC100828870
Function* Ribosomal RNA adenine dimethylase family protein ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial ribosomal RNA small subunit methyltransferase, mitochondrial-like ribosomal RNA small subunit methyltransferase, mitochondrial-like ribosomal RNA small subunit methyltransferase, mitochondrial uncharacterized LOC100192593 ribosomal RNA small subunit methyltransferase, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 5
ghi00240 Pyrimidine metabolism 5
ghi00480 Glutathione metabolism 5
ghi01232 Nucleotide metabolism 5
ghi03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 5
ghi00240 Pyrimidine metabolism 5
ghi00480 Glutathione metabolism 5
ghi01232 Nucleotide metabolism 5
ghi03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836768 103829618 107909429 107936557 102624070 100813522 100790908 100247089 7465423 11405665 101260604 102598434 107795324 107771929 4343346 100192593 100828870
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