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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   RAB11c   RAB GTPase 11C 
 ath-u.5   RAB11c   RAB GTPase 11C 
 ath-r.7   RAB11c   RAB GTPase 11C 
 ath-m.9   RAB11c   RAB GTPase 11C 
 ath-e.2   RAB11c   RAB GTPase 11C 
 ath-m.4.bio   RAB11c   RAB GTPase 11C 
 ath-m.4.lig   RAB11c   RAB GTPase 11C 
 ath-m.4.str   RAB11c   RAB GTPase 11C 
 ath-m.4.tis   RAB11c   RAB GTPase 11C 
 ath-u.5   RABA2c   RAB GTPase homolog A2C 
 ath-u.5   RABA2D   RAB GTPase homolog A2D 
 ath-u.5   RABA2b   RAB GTPase homolog A2B 
 bra-r.6   103873290   ras-related protein RABA2c 
 bra-r.6   103871737   ras-related protein RABA2a 
 bra-r.6   103836445   ras-related protein RABA2b 
 bna-r.1   125591351   ras-related protein RABA2b 
 bna-r.1   111208577   ras-related protein RABA2b-like 
 bna-r.1   106346261   ras-related protein RABA2a-like 
 ghi-r.1   107945198   ras-related protein RABA2a 
 cit-r.1   102613896   ras-related protein Rab2BV 
 cit-r.1   102612243   ras-related protein RABA2a 
 gma-u.5   100816268   ras-related protein Rab11C 
 vvi-u.5   100259150   ras-related protein RABA2a 
 vvi-u.5   100253476   ras-related protein Rab2BV-like 
 ppo-u.5   18106002   ras-related protein Rab11C 
 ppo-u.5   18098340   ras-related protein RABA2a 
 mtr-u.5   11425116   ras-related protein RABA2a 
 mtr-u.5   25492545   ras-related protein Rab11C 
 sly-u.5   101263852   ras-related protein RABA2a 
 sly-u.5   101260347   ras-related protein Rab2BV 
 sot-r.1   102604566   ras-related protein RABA2a-like 
 sot-r.1   102603180   ras-related protein Rab11A 
 nta-r.1   107763367   ras-related protein RABA2a-like 
 nta-r.1   107771247   ras-related protein RABA2a-like 
 nta-r.1   107784877   ras-related protein RABA2a 
 osa-u.5   4337555   ras-related protein RABA2a 
 osa-u.5   4334746   ras-related protein RABA2a 
 osa-u.5   4338288   ras-related protein RGP2-like 
 zma-u.5   100280532   uncharacterized LOC100280532 
 zma-u.5   100282310   uncharacterized LOC100282310 
 zma-u.5   100216670   Ras-related protein RABA2c 
 tae-r.2   123062595   ras-related protein Rab11C 
 tae-r.2   123087676   ras-related protein RABA2a 
 hvu-r.1   123453090   ras-related protein Rab11C 
 hvu-r.1   123444895   ras-related protein Rab2BV-like 
 hvu-r.1   123428721   ras-related protein RGP2 
 sbi-r.1   110431783   ras-related protein Rab11C 
 sbi-r.1   8066597   ras-related protein RABA2a 
 sbi-r.1   8066662   ras-related protein RGP2 
 bdi-r.1   100839494   ras-related protein Rab11C 
 bdi-r.1   100836616   ras-related protein RABA2a 
 bdi-r.1   100836026   ras-related protein RABA2a 
 cre-r.1   CHLRE_03g189250v5   uncharacterized protein 

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Top 50 coexpressed genes to RAB11c (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RAB11c (ath-m.4.hor coexpression data)

CoexMap"837490"


athRAB11c | Entrez gene ID : 837490      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 1 2 1 2 2 2 2 2 3 3 3 2 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04144 [list] [network] Endocytosis (156 genes)
GO BP
GO:0000911 [list] [network] cytokinesis by cell plate formation  (70 genes)  IMP  
GO CC
GO:0009504 [list] [network] cell plate  (43 genes)  IDA  
GO:0005768 [list] [network] endosome  (359 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_172434.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  cyto 1,  cysk_nucl 1,  plas 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_172434.1)
Subcellular
localization
TargetP
other 8  (predict for NP_172434.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
RAB11c
ath-u.5
for
RAB11c
ath-r.7
for
RAB11c
ath-m.9
for
RAB11c
ath-e.2
for
RAB11c
ath-m.4.bio
for
RAB11c
ath-m.4.lig
for
RAB11c
ath-m.4.str
for
RAB11c
ath-m.4.tis
for
RAB11c
ath-u.5
for
RABA2c
ath-u.5
for
RABA2D
ath-u.5
for
RABA2b
bra-r.6
for
103873290
bra-r.6
for
103871737
bra-r.6
for
103836445
bna-r.1
for
125591351
bna-r.1
for
111208577
bna-r.1
for
106346261
ghi-r.1
for
107945198
cit-r.1
for
102613896
cit-r.1
for
102612243
gma-u.5
for
100816268
vvi-u.5
for
100259150
vvi-u.5
for
100253476
ppo-u.5
for
18106002
ppo-u.5
for
18098340
mtr-u.5
for
11425116
mtr-u.5
for
25492545
sly-u.5
for
101263852
sly-u.5
for
101260347
sot-r.1
for
102604566
sot-r.1
for
102603180
nta-r.1
for
107763367
nta-r.1
for
107771247
nta-r.1
for
107784877
osa-u.5
for
4337555
osa-u.5
for
4334746
osa-u.5
for
4338288
zma-u.5
for
100280532
zma-u.5
for
100282310
zma-u.5
for
100216670
tae-r.2
for
123062595
tae-r.2
for
123087676
hvu-r.1
for
123453090
hvu-r.1
for
123444895
hvu-r.1
for
123428721
sbi-r.1
for
110431783
sbi-r.1
for
8066597
sbi-r.1
for
8066662
bdi-r.1
for
100839494
bdi-r.1
for
100836616
bdi-r.1
for
100836026
cre-r.1
for
CHLRE_03g189250v5


Ortholog ID: 577
Species ath ath ath bra bra bra bna bna bna ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sot sot nta nta osa osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol RAB11c RABA2c RABA2b LOC103873290 LOC103836445 LOC103851600 LOC106346261 LOC106433281 LOC106347554 LOC107906582 LOC102613896 LOC102612243 LOC100499980 LOC100799021 LOC100259150 LOC100253476 LOC18106002 LOC7489179 LOC11425116 LOC25492545 LOC101260347 LOC102604566 LOC102591603 LOC107814193 LOC107830561 LOC4337555 LOC4338288 LOC4334619 LOC100216670 LOC100193335 LOC100192685 LOC123123750 LOC123180848 LOC123444895 LOC123428721 LOC123426386 LOC110431783 LOC8066597 LOC8066662 LOC100839494 LOC100836616 LOC100823879 CHLRE_03g189250v5
Function* RAB GTPase 11C RAB GTPase homolog A2C RAB GTPase homolog A2B ras-related protein RABA2c ras-related protein RABA2b ras-related protein RABA2d ras-related protein RABA2a-like ras-related protein RABA2d ras-related protein RABA2c ras-related protein Rab11C ras-related protein Rab2BV ras-related protein RABA2a putative ras-related protein RABA2a ras-related protein Rab11C ras-related protein RABA2a ras-related protein Rab2BV-like ras-related protein Rab11C ras-related protein Rab11C ras-related protein RABA2a ras-related protein Rab11C ras-related protein Rab2BV ras-related protein RABA2a-like ras-related protein Rab2BV ras-related protein RABA2a ras-related protein Rab11C-like ras-related protein RABA2a ras-related protein RGP2-like ras-related protein Rab11C Ras-related protein RABA2c Ras protein Rab11A uncharacterized LOC100192685 ras-related protein RABA2a ras-related protein RGP2 ras-related protein Rab2BV-like ras-related protein RGP2 ras-related protein RABA2a-like ras-related protein Rab11C ras-related protein RABA2a ras-related protein RGP2 ras-related protein Rab11C ras-related protein RABA2a ras-related protein RGP2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath00541 Biosynthesis of various nucleotide sugars 2
ath01240 Biosynthesis of cofactors 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04016 MAPK signaling pathway - plant 4
ath04070 Phosphatidylinositol signaling system 4
ath04075 Plant hormone signal transduction 4
ath04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra01250 Biosynthesis of nucleotide sugars 3
bra00040 Pentose and glucuronate interconversions 2
bra00052 Galactose metabolism 2
bra00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 4
bra01200 Carbon metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 8
bna04016 MAPK signaling pathway - plant 6
bna04070 Phosphatidylinositol signaling system 6
bna04075 Plant hormone signal transduction 6
bna04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04075 Plant hormone signal transduction 2
gma00770 Pantothenate and CoA biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 6
gma03015 mRNA surveillance pathway 2
gma04136 Autophagy - other 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04130 SNARE interactions in vesicular transport 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo04130 SNARE interactions in vesicular transport 2
ppo04144 Endocytosis 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr00020 Citrate cycle (TCA cycle) 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly00520 Amino sugar and nucleotide sugar metabolism 3
sly01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 5
sot04142 Lysosome 5
sot04145 Phagosome 5
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00190 Oxidative phosphorylation 3
nta04145 Phagosome 3
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta03015 mRNA surveillance pathway 4
nta04136 Autophagy - other 4
nta04382 Cornified envelope formation 4
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
osa00510 N-Glycan biosynthesis 3
osa00513 Various types of N-glycan biosynthesis 3
osa04144 Endocytosis 2
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00430 Taurine and hypotaurine metabolism 6
tae00460 Cyanoamino acid metabolism 3
tae00480 Glutathione metabolism 3
tae00590 Arachidonic acid metabolism 3
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu01200 Carbon metabolism 3
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu00940 Phenylpropanoid biosynthesis 2
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
sbi04144 Endocytosis 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 3
sbi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 6
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 3
bdi04517 IgSF CAM signaling 3
bdi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
cre00190 Oxidative phosphorylation 2
cre04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837490 823836 837253 103873290 103836445 103851600 106346261 106433281 106347554 107906582 102613896 102612243 100499980 100799021 100259150 100253476 18106002 7489179 11425116 25492545 101260347 102604566 102591603 107814193 107830561 4337555 4338288 4334619 100216670 100193335 100192685 123123750 123180848 123444895 123428721 123426386 110431783 8066597 8066662 100839494 100836616 100823879 5717499
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