Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT1G15320   seed dormancy control protein 
 ath-m.9   AT1G15320   seed dormancy control protein 
 ath-m.4.bio   AT1G15320   seed dormancy control protein 
 ath-m.4.lig   AT1G15320   seed dormancy control protein 
 ath-m.4.str   AT1G15320   seed dormancy control protein 
 ath-m.4.tis   AT1G15320   seed dormancy control protein 
 bra-r.6   103872325   uncharacterized LOC103872325 
 bna-r.1   106383959   uncharacterized LOC106383959 
 bna-r.1   106403787   uncharacterized LOC106403787 
 cit-r.1   102618842   uncharacterized LOC102618842 
 sly-u.5   101256080   uncharacterized LOC101256080 

close


Top 50 coexpressed genes to AT1G15320 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G15320 (ath-m.4.hor coexpression data)

CoexMap"838101"


athAT1G15320 | Entrez gene ID : 838101      
Species ath bra bna cit sly sbi osa gma sot mtr tae hvu ppo vvi ghi zma cre nta bdi
Paralog 6 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (160 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IEA  
Protein NP_001117294.1 [sequence] [blastp]
NP_172984.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 5,  cyto_nucl 4,  plas 3  (predict for NP_001117294.1)
vacu 5,  extr 1,  chlo 1,  nucl 1,  cyto 1,  E.R. 1,  golg 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_172984.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001117294.1)
scret 9  (predict for NP_172984.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT1G15320
ath-m.9
for
AT1G15320
ath-m.4.bio
for
AT1G15320
ath-m.4.lig
for
AT1G15320
ath-m.4.str
for
AT1G15320
ath-m.4.tis
for
AT1G15320
bra-r.6
for
103872325
bna-r.1
for
106383959
bna-r.1
for
106403787
cit-r.1
for
102618842
sly-u.5
for
101256080


Ortholog ID: 13212
Species bra bna bna bna cit sly
Symbol LOC103872325 LOC106383959 LOC106447879 LOC106363684 LOC102618842 LOC101256080
Function* uncharacterized LOC103872325 uncharacterized LOC106383959 uncharacterized LOC106447879 uncharacterized LOC106363684 uncharacterized LOC102618842 uncharacterized LOC101256080
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00010 Glycolysis / Gluconeogenesis 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103872325 106383959 106447879 106363684 102618842 101256080
The preparation time of this page was 0.2 [sec].