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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   CLE9   CLAVATA3/ESR-RELATED 9 
 ath-m.9   CLE9   CLAVATA3/ESR-RELATED 9 
 ath-m.4.bio   CLE9   CLAVATA3/ESR-RELATED 9 
 ath-m.4.lig   CLE9   CLAVATA3/ESR-RELATED 9 
 ath-m.4.str   CLE9   CLAVATA3/ESR-RELATED 9 
 ath-m.4.tis   CLE9   CLAVATA3/ESR-RELATED 9 
 ath-u.5   CLE12   CLAVATA3/ESR-RELATED 12 
 ath-u.5   CLE13   CLAVATA3/ESR-RELATED 13 
 ghi-r.1   107959848   CLAVATA3/ESR (CLE)-related protein 13 
 osa-u.5   4329179   inactive protein FON2 SPARE1-like 
 hvu-r.1   123405097   protein FON2 SPARE1-like 
 bdi-r.1   104582618   uncharacterized LOC104582618 

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Top 50 coexpressed genes to CLE9 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CLE9 (ath-m.4.hor coexpression data)

CoexMap"839200"


athCLE9 | Entrez gene ID : 839200      
Species ath ghi osa hvu bdi sbi gma sot sly cit mtr bra tae bna ppo vvi zma cre nta
Paralog 8 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090059 [list] [network] protoxylem development  (4 genes)  IGI  
GO:2000038 [list] [network] regulation of stomatal complex development  (21 genes)  IGI  
GO:0010088 [list] [network] phloem development  (31 genes)  IDA  
GO:0045168 [list] [network] cell-cell signaling involved in cell fate commitment  (38 genes)  ISS  
GO:0010078 [list] [network] maintenance of root meristem identity  (40 genes)  IDA  
GO:0045595 [list] [network] regulation of cell differentiation  (66 genes)  IDA  
GO CC
GO:0048046 [list] [network] apoplast  (340 genes)  IDA ISM  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0048018 [list] [network] receptor ligand activity  (67 genes)  IPI  
Protein NP_001323415.1 [sequence] [blastp]
NP_564251.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  extr 3,  vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001323415.1)
extr 2,  chlo_mito 2,  chlo 1,  mito 1,  plas 1,  vacu 1,  cyto 1,  E.R. 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_564251.1)
Subcellular
localization
TargetP
scret 3  (predict for NP_001323415.1)
scret 8  (predict for NP_564251.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
CLE9
ath-m.9
for
CLE9
ath-m.4.bio
for
CLE9
ath-m.4.lig
for
CLE9
ath-m.4.str
for
CLE9
ath-m.4.tis
for
CLE9
ath-u.5
for
CLE12
ath-u.5
for
CLE13
ghi-r.1
for
107959848
osa-u.5
for
4329179
hvu-r.1
for
123405097
bdi-r.1
for
104582618


Ortholog ID: 2955
Species ath ath bra ghi ghi osa zma hvu bdi
Symbol CLE12 CLE13 LOC103831870 LOC107959848 LOC121225785 LOC4329179 LOC103649579 LOC123405097 LOC104582618
Function* CLAVATA3/ESR-RELATED 12 CLAVATA3/ESR-RELATED 13 CLAVATA3/ESR (CLE)-related protein 13 CLAVATA3/ESR (CLE)-related protein 13 CLAVATA3/ESR (CLE)-related protein 13 inactive protein FON2 SPARE1-like inactive protein FON2 SPARE1 protein FON2 SPARE1-like uncharacterized LOC104582618
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843211 843734 103831870 107959848 121225785 4329179 103649579 123405097 104582618
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