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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-u.5   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-r.7   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-m.9   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-e.2   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-m.4.bio   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-m.4.lig   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-m.4.str   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-m.4.tis   IRX9-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 bra-r.6   103829053   probable beta-1,4-xylosyltransferase IRX9H 
 bna-r.1   125574986   probable beta-1,4-xylosyltransferase IRX9H 
 bna-r.1   106358029   probable beta-1,4-xylosyltransferase IRX9H 
 bna-r.1   106389586   probable beta-1,4-xylosyltransferase IRX9H 
 ghi-r.1   107906947   probable beta-1,4-xylosyltransferase IRX9H 
 ghi-r.1   107910341   probable beta-1,4-xylosyltransferase IRX9H 
 ghi-r.1   107916710   probable beta-1,4-xylosyltransferase IRX9H 
 cit-r.1   102615799   probable beta-1,4-xylosyltransferase IRX9H 
 cit-r.1   102622234   probable beta-1,4-xylosyltransferase IRX9H 
 gma-u.5   100808765   probable beta-1,4-xylosyltransferase IRX9H-like 
 gma-u.5   100790621   probable beta-1,4-xylosyltransferase IRX9H 
 gma-u.5   100789348   probable beta-1,4-xylosyltransferase IRX9H 
 vvi-u.5   100248926   probable beta-1,4-xylosyltransferase IRX9H 
 vvi-u.5   100257821   probable beta-1,4-xylosyltransferase IRX9H 
 ppo-u.5   7495702   probable beta-1,4-xylosyltransferase IRX9H 
 ppo-u.5   7467207   probable beta-1,4-xylosyltransferase IRX9H 
 mtr-u.5   25490116   probable beta-1,4-xylosyltransferase IRX9H 
 mtr-u.5   11437095   probable beta-1,4-xylosyltransferase IRX9H 
 sly-u.5   543796   probable beta-1,4-xylosyltransferase IRX9H 
 sly-u.5   101247584   probable beta-1,4-xylosyltransferase IRX9H 
 sly-u.5   101262137   probable beta-1,4-xylosyltransferase IRX9H 
 sot-r.1   102584156   probable beta-1,4-xylosyltransferase IRX9H 
 sot-r.1   102584882   probable beta-1,4-xylosyltransferase IRX9H 
 sot-r.1   102595195   probable beta-1,4-xylosyltransferase IRX9H 
 nta-r.1   107771840   putative beta-1,4-xylosyltransferase IRX9H 
 nta-r.1   107787593   putative beta-1,4-xylosyltransferase IRX9H 
 nta-r.1   107804265   putative beta-1,4-xylosyltransferase IRX9H 
 osa-u.5   4348270   probable glucuronosyltransferase Os10g0205300 
 osa-u.5   4334894   probable glucuronosyltransferase Os04g0103100 
 osa-u.5   4339589   probable glucuronosyltransferase Os05g0559600 
 zma-u.5   100383623   uncharacterized LOC100383623 
 zma-u.5   606448   uncharacterized LOC606448 
 zma-u.5   100192819   putative beta-14-xylosyltransferase IRX9H 
 tae-r.2   123043266   probable glucuronosyltransferase Os04g0103100 
 tae-r.2   123051131   probable glucuronosyltransferase Os04g0103100 
 tae-r.2   123067864   probable beta-1,4-xylosyltransferase GT43E 
 hvu-r.1   123424424   probable glucuronosyltransferase Os04g0103100 
 hvu-r.1   123444096   probable beta-1,4-xylosyltransferase IRX9L 
 hvu-r.1   123450036   probable beta-1,4-xylosyltransferase GT43E 
 sbi-r.1   8054659   probable glucuronosyltransferase Os10g0205300 
 sbi-r.1   8074584   probable glucuronosyltransferase Os05g0559600 
 sbi-r.1   8061851   probable glucuronosyltransferase Os01g0675500 
 bdi-r.1   100827153   probable glucuronosyltransferase Os05g0559600 
 bdi-r.1   100834615   probable glucuronosyltransferase Os01g0675500 
 bdi-r.1   100842146   probable glucuronosyltransferase Os10g0205300 

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Top 50 coexpressed genes to IRX9-L (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to IRX9-L (ath-m.4.hor coexpression data)

CoexMap"839652"


athIRX9-L | Entrez gene ID : 839652      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 3 2 3 2 2 2 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010417 [list] [network] glucuronoxylan biosynthetic process  (12 genes)  IMP  
GO:0045492 [list] [network] xylan biosynthetic process  (31 genes)  IMP  
GO:0010584 [list] [network] pollen exine formation  (33 genes)  IMP  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (47 genes)  IMP  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  IDA  
GO MF
GO:0042285 [list] [network] xylosyltransferase activity  (15 genes)  IMP  
GO:0016757 [list] [network] glycosyltransferase activity  (554 genes)  ISS  
Protein NP_564290.2 [sequence] [blastp]
NP_973922.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 1,  plas 1,  golg 1,  nucl_plas 1,  golg_plas 1  (predict for NP_564290.2)
chlo 3,  nucl 1,  plas 1,  golg 1,  nucl_plas 1,  golg_plas 1  (predict for NP_973922.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_564290.2)
other 4,  chlo 3  (predict for NP_973922.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
IRX9-L
ath-u.5
for
IRX9-L
ath-r.7
for
IRX9-L
ath-m.9
for
IRX9-L
ath-e.2
for
IRX9-L
ath-m.4.bio
for
IRX9-L
ath-m.4.lig
for
IRX9-L
ath-m.4.str
for
IRX9-L
ath-m.4.tis
for
IRX9-L
bra-r.6
for
103829053
bna-r.1
for
125574986
bna-r.1
for
106358029
bna-r.1
for
106389586
ghi-r.1
for
107906947
ghi-r.1
for
107910341
ghi-r.1
for
107916710
cit-r.1
for
102615799
cit-r.1
for
102622234
gma-u.5
for
100808765
gma-u.5
for
100790621
gma-u.5
for
100789348
vvi-u.5
for
100248926
vvi-u.5
for
100257821
ppo-u.5
for
7495702
ppo-u.5
for
7467207
mtr-u.5
for
25490116
mtr-u.5
for
11437095
sly-u.5
for
543796
sly-u.5
for
101247584
sly-u.5
for
101262137
sot-r.1
for
102584156
sot-r.1
for
102584882
sot-r.1
for
102595195
nta-r.1
for
107771840
nta-r.1
for
107787593
nta-r.1
for
107804265
osa-u.5
for
4348270
osa-u.5
for
4334894
osa-u.5
for
4339589
zma-u.5
for
100383623
zma-u.5
for
606448
zma-u.5
for
100192819
tae-r.2
for
123043266
tae-r.2
for
123051131
tae-r.2
for
123067864
hvu-r.1
for
123424424
hvu-r.1
for
123444096
hvu-r.1
for
123450036
sbi-r.1
for
8054659
sbi-r.1
for
8074584
sbi-r.1
for
8061851
bdi-r.1
for
100827153
bdi-r.1
for
100834615
bdi-r.1
for
100842146


Ortholog ID: 1723
Species ath bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol IRX9-L LOC103829053 LOC125574986 LOC106358029 LOC106389586 LOC107906947 LOC107942179 LOC107951126 LOC102615799 LOC102622234 LOC100808765 LOC100790621 LOC100789348 LOC100248926 LOC100257821 LOC7495702 LOC7467207 LOC25490116 LOC11437095 LOC543796 LOC101247584 LOC101262137 LOC102584156 LOC102584882 LOC102595195 LOC107787593 LOC107804265 LOC107819108 LOC4348270 LOC4334894 LOC4339589 LOC100383623 LOC100192819 LOC103639412 LOC123051131 LOC123070588 LOC123078994 LOC123424424 LOC123444096 LOC123450036 LOC8054659 LOC8074584 LOC8056947 LOC100827153 LOC100834615 LOC100841498
Function* Nucleotide-diphospho-sugar transferases superfamily protein probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H-like probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase IRX9H putative beta-1,4-xylosyltransferase IRX9H putative beta-1,4-xylosyltransferase IRX9H putative beta-1,4-xylosyltransferase IRX9H probable glucuronosyltransferase Os10g0205300 probable glucuronosyltransferase Os04g0103100 probable glucuronosyltransferase Os05g0559600 uncharacterized LOC100383623 putative beta-14-xylosyltransferase IRX9H probable beta-1,4-xylosyltransferase GT43E probable glucuronosyltransferase Os04g0103100 probable beta-1,4-xylosyltransferase IRX9L probable beta-1,4-xylosyltransferase IRX9L probable glucuronosyltransferase Os04g0103100 probable beta-1,4-xylosyltransferase IRX9L probable beta-1,4-xylosyltransferase GT43E probable glucuronosyltransferase Os10g0205300 probable glucuronosyltransferase Os05g0559600 probable glucuronosyltransferase Os04g0103100 probable glucuronosyltransferase Os05g0559600 probable glucuronosyltransferase Os01g0675500 probable glucuronosyltransferase Os04g0103100
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 6
bra04142 Lysosome 4
bra05100 Bacterial invasion of epithelial cells 4
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 8
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi01232 Nucleotide metabolism 4
ghi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00541 Biosynthesis of various nucleotide sugars 2
vvi03015 mRNA surveillance pathway 2
vvi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 5
mtr01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00510 N-Glycan biosynthesis 4
sot04141 Protein processing in endoplasmic reticulum 4
sot00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 5
nta04148 Efferocytosis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 3
sbi00770 Pantothenate and CoA biosynthesis 2
sbi00071 Fatty acid degradation 2
sbi01040 Biosynthesis of unsaturated fatty acids 2
sbi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839652 103829053 125574986 106358029 106389586 107906947 107942179 107951126 102615799 102622234 100808765 100790621 100789348 100248926 100257821 7495702 7467207 25490116 11437095 543796 101247584 101262137 102584156 102584882 102595195 107787593 107804265 107819108 4348270 4334894 4339589 100383623 100192819 103639412 123051131 123070588 123078994 123424424 123444096 123450036 8054659 8074584 8056947 100827153 100834615 100841498
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