ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.hor	NAC012	NAC domain containing protein 12
ath-m.9	NAC012	NAC domain containing protein 12
ath-m.4.bio	NAC012	NAC domain containing protein 12
ath-m.4.lig	NAC012	NAC domain containing protein 12
ath-m.4.str	NAC012	NAC domain containing protein 12
ath-m.4.tis	NAC012	NAC domain containing protein 12
bra-r.6	103874763	NAC domain-containing protein 12
bra-r.6	103866434	NAC domain-containing protein 43
bna-r.1	106353299	NAC domain-containing protein 66
ghi-r.1	107923129	NAC domain-containing protein 43
ghi-r.1	107942131	NAC domain-containing protein 43
ghi-r.1	107945882	NAC domain-containing protein 43-like
cit-r.1	102629852	NAC domain-containing protein 12-like
gma-u.5	SHAT1-5	NAC domain-containing protein 43-like
vvi-u.5	100244394	NAC domain-containing protein 43
ppo-u.5	7487740	NAC domain-containing protein 43
ppo-u.5	7489087	NAC domain-containing protein 43
ppo-u.5	7491403	NAC domain-containing protein 43
mtr-u.5	25500625	NAC domain-containing protein 43
sly-u.5	101263643	NAC domain-containing protein 43
sot-r.1	102578181	NAC domain-containing protein 43
sot-r.1	102602614	NAC domain-containing protein 66-like
nta-r.1	107824217	NAC domain-containing protein 43-like
nta-r.1	107774867	NAC domain-containing protein 43-like
nta-r.1	107765469	NAC domain-containing protein 43-like
osa-u.5	4340011	NAC domain-containing protein 43
osa-u.5	4344514	NAC domain-containing protein 43
zma-u.5	103628975	NAC domain-containing protein 43
zma-u.5	103629433	NAC domain-containing protein 43
zma-u.5	100272652	uncharacterized LOC100272652
hvu-r.1	123412641	NAC domain-containing protein 66-like
hvu-r.1	123410487	NAC domain-containing protein 66-like
sbi-r.1	8066098	NAC domain-containing protein 43
sbi-r.1	8069067	NAC domain-containing protein 43
bdi-r.1	SWN8	NAC domain-containing protein 43-like
bdi-r.1	SWN7	NAC domain-containing protein 12-like

Annotation

functional annotation

KEGG

GO BP

GO:0010047 [list] [network] fruit dehiscence	(13 genes)	IMP
GO:0009809 [list] [network] lignin biosynthetic process	(41 genes)	IGI
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis	(47 genes)	IGI IMP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription	(262 genes)	IDA

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

IDA ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(716 genes)	IPI
GO:0043565 [list] [network] sequence-specific DNA binding	(875 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	ISS

Protein

NP_174554.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 1, cyto 1, vacu 1, cysk 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for NP_174554.1)

Subcellular
localization
TargetP

other 8

(predict for NP_174554.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.hor for NAC012	ath-m.9 for NAC012	ath-m.4.bio for NAC012	ath-m.4.lig for NAC012	ath-m.4.str for NAC012	ath-m.4.tis for NAC012	bra-r.6 for 103874763	bra-r.6 for 103866434	bna-r.1 for 106353299	ghi-r.1 for 107923129	ghi-r.1 for 107942131	ghi-r.1 for 107945882	cit-r.1 for 102629852	gma-u.5 for SHAT1-5	vvi-u.5 for 100244394	ppo-u.5 for 7487740	ppo-u.5 for 7489087	ppo-u.5 for 7491403	mtr-u.5 for 25500625	sly-u.5 for 101263643	sot-r.1 for 102578181	sot-r.1 for 102602614	nta-r.1 for 107824217	nta-r.1 for 107774867	nta-r.1 for 107765469	osa-u.5 for 4340011	osa-u.5 for 4344514	zma-u.5 for 103628975	zma-u.5 for 103629433	zma-u.5 for 100272652	hvu-r.1 for 123412641	hvu-r.1 for 123410487	sbi-r.1 for 8066098	sbi-r.1 for 8069067	bdi-r.1 for SWN8	bdi-r.1 for SWN7

Ortholog

Ortholog ID: 1077

Species

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

SHAT1-5

SWN8

SWN7

Function^*