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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT1G55660   FBD, F-box and Leucine Rich Repeat domains containing protein 
 ath-m.9   AT1G55660   FBD, F-box and Leucine Rich Repeat domains containing protein 
 ath-m.4.bio   AT1G55660   FBD, F-box and Leucine Rich Repeat domains containing protein 
 ath-m.4.lig   AT1G55660   FBD, F-box and Leucine Rich Repeat domains containing protein 
 ath-m.4.str   AT1G55660   FBD, F-box and Leucine Rich Repeat domains containing protein 
 ath-m.4.tis   AT1G55660   FBD, F-box and Leucine Rich Repeat domains containing protein 
 bna-r.1   106454995   FBD-associated F-box protein At5g38590-like 
 gma-u.5   102661462   FBD-associated F-box protein At3g52670 
 mtr-u.5   112420449   FBD-associated F-box protein At4g10400 

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Top 50 coexpressed genes to AT1G55660 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G55660 (ath-m.4.hor coexpression data)

CoexMap"842015"


athAT1G55660 | Entrez gene ID : 842015      
Species ath bna gma mtr cit osa ghi ppo hvu nta cre sot tae zma bdi sbi bra sly vvi
Paralog 6 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (7 genes)  IMP  
GO:0048579 [list] [network] negative regulation of long-day photoperiodism, flowering  (14 genes)  IGI  
GO:0048587 [list] [network] regulation of short-day photoperiodism, flowering  (15 genes)  IGI  
GO:1902584 [list] [network] positive regulation of response to water deprivation  (19 genes)  IMP  
GO:0010187 [list] [network] negative regulation of seed germination  (29 genes)  IMP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (101 genes)  IMP  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (41 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO MF
Protein NP_001185242.1 [sequence] [blastp]
NP_175962.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  vacu 1,  E.R. 1,  E.R._vacu 1,  chlo 1,  nucl 1,  mito 1,  extr 1,  chlo_mito 1,  E.R._plas 1  (predict for NP_001185242.1)
E.R. 4,  chlo 1,  cyto 1,  nucl 1,  mito 1,  plas 1,  extr 1,  vacu 1,  nucl_plas 1,  cyto_pero 1,  mito_plas 1  (predict for NP_175962.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001185242.1)
scret 9  (predict for NP_175962.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT1G55660
ath-m.9
for
AT1G55660
ath-m.4.bio
for
AT1G55660
ath-m.4.lig
for
AT1G55660
ath-m.4.str
for
AT1G55660
ath-m.4.tis
for
AT1G55660
bna-r.1
for
106454995
gma-u.5
for
102661462
mtr-u.5
for
112420449


Ortholog ID: 140
Species ath bna gma gma mtr
Symbol AT4G10400 LOC106389510 LOC102661462 LOC100794386 LOC11442468
Function* F-box/RNI-like/FBD-like domains-containing protein F-box/FBD/LRR-repeat protein At5g56420-like FBD-associated F-box protein At3g52670 F-box/FBD/LRR-repeat protein At5g56420 F-box/FBD/LRR-repeat protein At4g00160
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826632 106389510 102661462 100794386 11442468
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