Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT1G78560   Sodium Bile acid symporter family 
 ath-u.5   AT1G78560   Sodium Bile acid symporter family 
 ath-r.7   AT1G78560   Sodium Bile acid symporter family 
 ath-m.9   AT1G78560   Sodium Bile acid symporter family 
 ath-e.2   AT1G78560   Sodium Bile acid symporter family 
 ath-m.4.bio   AT1G78560   Sodium Bile acid symporter family 
 ath-m.4.lig   AT1G78560   Sodium Bile acid symporter family 
 ath-m.4.str   AT1G78560   Sodium Bile acid symporter family 
 ath-m.4.tis   AT1G78560   Sodium Bile acid symporter family 
 bra-r.6   103832333   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 bna-r.1   106354694   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 bna-r.1   125576394   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 ghi-r.1   107928104   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 cit-r.1   102617572   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 gma-u.5   100788854   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 ppo-u.5   18103331   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 mtr-u.5   25487179   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 mtr-u.5   25487190   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 sly-u.5   101266486   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 sot-r.1   102593673   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 nta-r.1   107780543   putative sodium/metabolite cotransporter BASS1, chloroplastic 
 nta-r.1   107784030   putative sodium/metabolite cotransporter BASS1, chloroplastic 
 nta-r.1   107827528   putative sodium/metabolite cotransporter BASS1, chloroplastic 
 osa-u.5   4335634   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 zma-u.5   103643358   Bile Acid Sodium Symporter1 
 tae-r.2   123183014   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 tae-r.2   123145040   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 tae-r.2   123067469   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 hvu-r.1   123449753   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 sbi-r.1   8065144   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 bdi-r.1   100836974   probable sodium/metabolite cotransporter BASS1, chloroplastic 
 cre-r.1   CHLRE_17g725650v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT1G78560 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G78560 (ath-m.4.hor coexpression data)

CoexMap"844192"


athAT1G78560 | Entrez gene ID : 844192      
Species ath bra bna ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 9 1 2 1 1 1 1 2 1 1 3 1 1 3 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015887 [list] [network] pantothenate transmembrane transport  (1 genes)  IGI  
GO:0098717 [list] [network] pantothenate import across plasma membrane  (1 genes)  IMP  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (66 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0015233 [list] [network] pantothenate transmembrane transporter activity  (1 genes)  IGI  
Protein NP_565182.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_565182.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_565182.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT1G78560
ath-u.5
for
AT1G78560
ath-r.7
for
AT1G78560
ath-m.9
for
AT1G78560
ath-e.2
for
AT1G78560
ath-m.4.bio
for
AT1G78560
ath-m.4.lig
for
AT1G78560
ath-m.4.str
for
AT1G78560
ath-m.4.tis
for
AT1G78560
bra-r.6
for
103832333
bna-r.1
for
106354694
bna-r.1
for
125576394
ghi-r.1
for
107928104
cit-r.1
for
102617572
gma-u.5
for
100788854
ppo-u.5
for
18103331
mtr-u.5
for
25487179
mtr-u.5
for
25487190
sly-u.5
for
101266486
sot-r.1
for
102593673
nta-r.1
for
107780543
nta-r.1
for
107784030
nta-r.1
for
107827528
osa-u.5
for
4335634
zma-u.5
for
103643358
tae-r.2
for
123183014
tae-r.2
for
123145040
tae-r.2
for
123067469
hvu-r.1
for
123449753
sbi-r.1
for
8065144
bdi-r.1
for
100836974
cre-r.1
for
CHLRE_17g725650v5


Ortholog ID: 9300
Species ath bra bna bna ghi cit gma ppo mtr mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT1G78560 LOC103832333 LOC106354694 LOC125576394 LOC107928104 LOC102617572 LOC100788854 LOC18103331 LOC25487179 LOC25487190 LOC101266486 LOC102593673 LOC107780543 LOC107784030 LOC107827528 LOC4335634 LOC103643358 LOC123183014 LOC123145040 LOC123067469 LOC123449753 LOC8065144 LOC100836974 CHLRE_17g725650v5
Function* Sodium Bile acid symporter family probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic putative sodium/metabolite cotransporter BASS1, chloroplastic putative sodium/metabolite cotransporter BASS1, chloroplastic putative sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic Bile Acid Sodium Symporter1 probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic probable sodium/metabolite cotransporter BASS1, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 5
ath01230 Biosynthesis of amino acids 4
ath00061 Fatty acid biosynthesis 4
ath01212 Fatty acid metabolism 4
ath00780 Biotin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 3
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
cit00770 Pantothenate and CoA biosynthesis 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 10
gma00300 Lysine biosynthesis 5
gma00220 Arginine biosynthesis 3
gma00261 Monobactam biosynthesis 3
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00240 Pyrimidine metabolism 3
mtr00500 Starch and sucrose metabolism 3
mtr00061 Fatty acid biosynthesis 2
mtr00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00410 beta-Alanine metabolism 3
mtr01240 Biosynthesis of cofactors 2
mtr00240 Pyrimidine metabolism 2
mtr00770 Pantothenate and CoA biosynthesis 2
mtr00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 4
sly00620 Pyruvate metabolism 3
sly01200 Carbon metabolism 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 3
sot01200 Carbon metabolism 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00010 Glycolysis / Gluconeogenesis 2
sot00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 7
nta00740 Riboflavin metabolism 3
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00740 Riboflavin metabolism 2
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00261 Monobactam biosynthesis 3
tae00270 Cysteine and methionine metabolism 3
tae00300 Lysine biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 4
tae00500 Starch and sucrose metabolism 4
tae00999 Biosynthesis of various plant secondary metabolites 4
tae00260 Glycine, serine and threonine metabolism 3
tae00261 Monobactam biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 5
tae00500 Starch and sucrose metabolism 5
tae00999 Biosynthesis of various plant secondary metabolites 5
tae00010 Glycolysis / Gluconeogenesis 2
tae00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844192 103832333 106354694 125576394 107928104 102617572 100788854 18103331 25487179 25487190 101266486 102593673 107780543 107784030 107827528 4335634 103643358 123183014 123145040 123067469 123449753 8065144 100836974 66057048
The preparation time of this page was 0.1 [sec].