ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	110433897	protein DETOXIFICATION 45, chloroplastic-like
sbi-r.1	8055496	protein DETOXIFICATION 44, chloroplastic
sbi-r.1	8085298	protein DETOXIFICATION 42
zma-u.5	103630881	uncharacterized LOC103630881
zma-u.5	100501783	uncharacterized LOC100501783
zma-u.5	100383875	multidrug and toxic compound extrusion3
osa-u.5	4332069	protein DETOXIFICATION 42
osa-u.5	4347774	protein DETOXIFICATION 45, chloroplastic
osa-u.5	4348274	protein DETOXIFICATION 42
tae-r.2	101290670	protein DETOXIFICATION 42
tae-r.2	123129242	protein DETOXIFICATION 45, chloroplastic
tae-r.2	123060391	protein DETOXIFICATION 42
hvu-r.1	123448136	protein DETOXIFICATION 44, chloroplastic-like
hvu-r.1	123444390	protein DETOXIFICATION 42-like
bdi-r.1	100825239	protein DETOXIFICATION 45, chloroplastic
bdi-r.1	100842762	protein DETOXIFICATION 42
bdi-r.1	100840460	uncharacterized LOC100840460
ath-u.5	AT2G38330	MATE efflux family protein
ath-u.5	FRD3	MATE efflux family protein
ath-u.5	AT4G38380	MATE efflux family protein
gma-u.5	MATE13	citrate-proton symporter
gma-u.5	100805918	protein DETOXIFICATION 44, chloroplastic
sly-u.5	101245696	protein DETOXIFICATION 43
sly-u.5	101248929	protein DETOXIFICATION 44, chloroplastic
bra-r.6	103870617	protein DETOXIFICATION 43
bra-r.6	103857775	protein DETOXIFICATION 44, chloroplastic
bra-r.6	103859257	protein DETOXIFICATION 43
vvi-u.5	100267546	protein DETOXIFICATION 45, chloroplastic
ppo-u.5	7488720	protein DETOXIFICATION 44, chloroplastic
ppo-u.5	7474953	protein DETOXIFICATION 45, chloroplastic
ppo-u.5	7482281	protein DETOXIFICATION 43
mtr-u.5	11444674	protein DETOXIFICATION 43
mtr-u.5	25501046	protein DETOXIFICATION 43
mtr-u.5	11438253	protein DETOXIFICATION 43
ghi-r.1	107889337	protein DETOXIFICATION 42
ghi-r.1	107958084	protein DETOXIFICATION 44, chloroplastic
ghi-r.1	107898538	protein DETOXIFICATION 45, chloroplastic
bna-r.1	125574806	protein DETOXIFICATION 42-like
bna-r.1	111198031	protein DETOXIFICATION 42-like
bna-r.1	125580421	protein DETOXIFICATION 43-like
sot-r.1	102593991	protein DETOXIFICATION 42-like
sot-r.1	102604703	protein DETOXIFICATION 45, chloroplastic
sot-r.1	102582950	protein DETOXIFICATION 43
cit-r.1	102621711	protein DETOXIFICATION 45, chloroplastic
cit-r.1	102626459	protein DETOXIFICATION 42
nta-r.1	107762577	protein DETOXIFICATION 44, chloroplastic
nta-r.1	107780510	protein DETOXIFICATION 45, chloroplastic
nta-r.1	107771007	protein DETOXIFICATION 45, chloroplastic-like
cre-r.1	CHLRE_17g739650v5	uncharacterized protein
cre-r.1	CHLRE_08g369600v5	uncharacterized protein

Top 50 coexpressed genes to 110433897 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 110433897 (sbi-r.1 coexpression data)

CoexMap"110433897"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(920 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3172 genes)

IEA

GO MF

GO:0042910 [list] [network] xenobiotic transmembrane transporter activity	(54 genes)	IEA
GO:0015297 [list] [network] antiporter activity	(142 genes)	IEA

Protein

XP_021312604.1 [sequence] [blastp]
XP_021312605.1 [sequence] [blastp]
XP_021312606.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9	(predict for XP_021312604.1)
chlo 9	(predict for XP_021312605.1)
plas 4, chlo 2, nucl_plas 2, golg_plas 2, cysk_plas 2, E.R._plas 2, mito_plas 2	(predict for XP_021312606.1)

Subcellular
localization
TargetP

chlo 8	(predict for XP_021312604.1)
chlo 8	(predict for XP_021312605.1)
other 7	(predict for XP_021312606.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 110433897	sbi-r.1 for 8055496	sbi-r.1 for 8085298	zma-u.5 for 103630881	zma-u.5 for 100501783	zma-u.5 for 100383875	osa-u.5 for 4332069	osa-u.5 for 4347774	osa-u.5 for 4348274	tae-r.2 for 101290670	tae-r.2 for 123129242	tae-r.2 for 123060391	hvu-r.1 for 123448136	hvu-r.1 for 123444390	bdi-r.1 for 100825239	bdi-r.1 for 100842762	bdi-r.1 for 100840460	ath-u.5 for AT2G38330	ath-u.5 for FRD3	ath-u.5 for AT4G38380	gma-u.5 for MATE13	gma-u.5 for 100805918	sly-u.5 for 101245696	sly-u.5 for 101248929	bra-r.6 for 103870617	bra-r.6 for 103857775	bra-r.6 for 103859257	vvi-u.5 for 100267546	ppo-u.5 for 7488720	ppo-u.5 for 7474953	ppo-u.5 for 7482281	mtr-u.5 for 11444674	mtr-u.5 for 25501046	mtr-u.5 for 11438253	ghi-r.1 for 107889337	ghi-r.1 for 107958084	ghi-r.1 for 107898538	bna-r.1 for 125574806	bna-r.1 for 111198031	bna-r.1 for 125580421	sot-r.1 for 102593991	sot-r.1 for 102604703	sot-r.1 for 102582950	cit-r.1 for 102621711	cit-r.1 for 102626459	nta-r.1 for 107762577	nta-r.1 for 107780510	nta-r.1 for 107771007	cre-r.1 for CHLRE_17g739650v5	cre-r.1 for CHLRE_08g369600v5

Ortholog

Ortholog ID: 361

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

FRD3

Function^*

protein DETOXIFICATION 45, chloroplastic-like

protein DETOXIFICATION 42

uncharacterized LOC103630881

uncharacterized LOC100501783

uncharacterized LOC100322876

protein DETOXIFICATION 42