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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110434430   trafficking protein particle complex subunit 12 
 zma-u.5   100194254   Tetratricopeptide repeat (TPR)-like superfamily protein 
 osa-u.5   4329625   trafficking protein particle complex subunit 12 
 tae-r.2   123127684   trafficking protein particle complex subunit 12 
 tae-r.2   123137570   trafficking protein particle complex subunit 12 
 tae-r.2   123144906   trafficking protein particle complex subunit 12 
 hvu-r.1   123403461   trafficking protein particle complex subunit 12 
 bdi-r.1   104583780   trafficking protein particle complex subunit 12 
 ath-u.5   AT4G39820   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100779691   trafficking protein particle complex subunit 12 
 gma-u.5   100779190   trafficking protein particle complex subunit 12 
 sly-u.5   101248779   uncharacterized LOC101248779 
 vvi-u.5   100247539   uncharacterized LOC100247539 
 vvi-u.5   100264688   uncharacterized LOC100264688 
 ppo-u.5   7496507   uncharacterized LOC7496507 
 mtr-u.5   11413300   trafficking protein particle complex subunit 12 
 ghi-r.1   107954687   trafficking protein particle complex subunit 12 
 ghi-r.1   107945501   trafficking protein particle complex subunit 12 
 ghi-r.1   107911646   trafficking protein particle complex subunit 12 
 bna-r.1   106430501   trafficking protein particle complex subunit 12-like 
 bna-r.1   106361369   trafficking protein particle complex subunit 12-like 
 bna-r.1   125583422   trafficking protein particle complex subunit 12-like 
 sot-r.1   102588015   trafficking protein particle complex subunit 12 
 cit-r.1   102630369   uncharacterized LOC102630369 
 nta-r.1   107817373   uncharacterized LOC107817373 
 nta-r.1   107759317   uncharacterized LOC107759317 

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Top 50 coexpressed genes to 110434430 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110434430 (sbi-r.1 coexpression data)

CoexMap"110434430"


sbiLOC110434430 | Entrez gene ID : 110434430    
Species sbi zma osa tae hvu bdi ath gma sly vvi ppo mtr ghi bna sot cit nta cre bra
Paralog 1 1 1 3 1 1 1 2 1 2 1 1 3 3 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021314127.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cyto 1  (predict for XP_021314127.1)
Subcellular
localization
TargetP
other 7,  chlo 6  (predict for XP_021314127.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110434430
zma-u.5
for
100194254
osa-u.5
for
4329625
tae-r.2
for
123127684
tae-r.2
for
123137570
tae-r.2
for
123144906
hvu-r.1
for
123403461
bdi-r.1
for
104583780
ath-u.5
for
AT4G39820
gma-u.5
for
100779691
gma-u.5
for
100779190
sly-u.5
for
101248779
vvi-u.5
for
100247539
vvi-u.5
for
100264688
ppo-u.5
for
7496507
mtr-u.5
for
11413300
ghi-r.1
for
107954687
ghi-r.1
for
107945501
ghi-r.1
for
107911646
bna-r.1
for
106430501
bna-r.1
for
106361369
bna-r.1
for
125583422
sot-r.1
for
102588015
cit-r.1
for
102630369
nta-r.1
for
107817373
nta-r.1
for
107759317


Ortholog ID: 8581
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly vvi vvi ppo mtr ghi ghi ghi bna bna bna sot cit nta nta
Symbol LOC110434430 LOC100194254 LOC4329625 LOC123127684 LOC123137570 LOC123144906 LOC123403461 LOC104583780 AT4G39820 LOC100779691 LOC100779190 LOC101248779 LOC100247539 LOC100264688 LOC7496507 LOC11413300 LOC107945501 LOC107911646 LOC107899680 LOC106430501 LOC106361369 LOC125583422 LOC102588015 LOC102630369 LOC107817373 LOC107759317
Function* trafficking protein particle complex subunit 12 Tetratricopeptide repeat (TPR)-like superfamily protein trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 Tetratricopeptide repeat (TPR)-like superfamily protein trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 uncharacterized LOC101248779 uncharacterized LOC100247539 uncharacterized LOC100264688 uncharacterized LOC7496507 trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12 trafficking protein particle complex subunit 12-like trafficking protein particle complex subunit 12-like trafficking protein particle complex subunit 12-like trafficking protein particle complex subunit 12 uncharacterized LOC102630369 uncharacterized LOC107817373 uncharacterized LOC107759317
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly04141 Protein processing in endoplasmic reticulum 2
sly00190 Oxidative phosphorylation 2
sly00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00230 Purine metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00230 Purine metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00230 Purine metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110434430 100194254 4329625 123127684 123137570 123144906 123403461 104583780 830141 100779691 100779190 101248779 100247539 100264688 7496507 11413300 107945501 107911646 107899680 106430501 106361369 125583422 102588015 102630369 107817373 107759317
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