ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8054983	uncharacterized LOC8054983
sbi-r.1	8085745	uncharacterized LOC8085745
zma-u.5	100278440	uncharacterized LOC100278440
zma-u.5	113604965	uncharacterized LOC113604965
osa-u.5	4347738	uncharacterized LOC4347738
osa-u.5	4335218	uncharacterized LOC4335218
tae-r.2	123043405	uncharacterized LOC123043405
tae-r.2	123051271	uncharacterized LOC123051271
hvu-r.1	123424515	uncharacterized LOC123424515
hvu-r.1	123400205	uncharacterized LOC123400205
bdi-r.1	100839255	uncharacterized LOC100839255
bdi-r.1	100834992	uncharacterized LOC100834992
ath-u.5	AT1G20225	Thioredoxin superfamily protein
ath-u.5	AT1G76020	Thioredoxin superfamily protein
gma-u.5	100527484	DsbC_N domain-containing protein
gma-u.5	100500267	uncharacterized LOC100500267
gma-u.5	113001852	uncharacterized LOC113001852
sly-u.5	101265345	uncharacterized LOC101265345
sly-u.5	101254074	uncharacterized LOC101254074
bra-r.6	103872819	uncharacterized LOC103872819
bra-r.6	103832046	uncharacterized LOC103832046
bra-r.6	103852999	uncharacterized LOC103852999
vvi-u.5	100854733	uncharacterized LOC100854733
ppo-u.5	7493994	uncharacterized LOC7493994
mtr-u.5	25480899	uncharacterized LOC25480899
mtr-u.5	120577444	peptidyl-prolyl cis-trans isomerase CYP57
ghi-r.1	107938107	uncharacterized LOC107938107
bna-r.1	BNAA07G32260D	uncharacterized BNAA07G32260D
bna-r.1	106405838	uncharacterized LOC106405838
bna-r.1	125594033	uncharacterized LOC125594033
sot-r.1	102585780	uncharacterized LOC102585780
sot-r.1	102586117	uncharacterized LOC102586117
cit-r.1	102618693	hypothetical protein
nta-r.1	107806105	uncharacterized LOC107806105
nta-r.1	107813122	uncharacterized LOC107813122
nta-r.1	107816711	uncharacterized LOC107816711

Top 50 coexpressed genes to 8054983 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8054983 (sbi-r.1 coexpression data)

CoexMap"8054983"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002462758.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, nucl_plas 4, mito 2, plas 2, chlo 1

(predict for XP_002462758.2)

Subcellular
localization
TargetP

other 7

(predict for XP_002462758.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8054983	sbi-r.1 for 8085745	zma-u.5 for 100278440	zma-u.5 for 113604965	osa-u.5 for 4347738	osa-u.5 for 4335218	tae-r.2 for 123043405	tae-r.2 for 123051271	hvu-r.1 for 123424515	hvu-r.1 for 123400205	bdi-r.1 for 100839255	bdi-r.1 for 100834992	ath-u.5 for AT1G20225	ath-u.5 for AT1G76020	gma-u.5 for 100527484	gma-u.5 for 100500267	gma-u.5 for 113001852	sly-u.5 for 101265345	sly-u.5 for 101254074	bra-r.6 for 103872819	bra-r.6 for 103832046	bra-r.6 for 103852999	vvi-u.5 for 100854733	ppo-u.5 for 7493994	mtr-u.5 for 25480899	mtr-u.5 for 120577444	ghi-r.1 for 107938107	bna-r.1 for BNAA07G32260D	bna-r.1 for 106405838	bna-r.1 for 125594033	sot-r.1 for 102585780	sot-r.1 for 102586117	cit-r.1 for 102618693	nta-r.1 for 107806105	nta-r.1 for 107813122	nta-r.1 for 107816711

Ortholog

Ortholog ID: 3517

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8054983

uncharacterized LOC8085745

uncharacterized LOC100278440

uncharacterized LOC113604965

uncharacterized LOC4347738

uncharacterized LOC4335218

uncharacterized LOC123051271

uncharacterized LOC123187232

uncharacterized LOC123424515

uncharacterized LOC123400205

uncharacterized LOC100839255

uncharacterized LOC100834992

Thioredoxin superfamily protein

DsbC_N domain-containing protein

uncharacterized LOC100500267

uncharacterized LOC113001852

uncharacterized LOC101265345

uncharacterized LOC101254074

uncharacterized LOC103872819

uncharacterized LOC103832046

uncharacterized LOC103852999

uncharacterized LOC100854733

uncharacterized LOC7493994

uncharacterized LOC25480899

peptidyl-prolyl cis-trans isomerase CYP57

uncharacterized LOC107938107

uncharacterized BNAA07G32260D

uncharacterized LOC111206407

uncharacterized BNACNNG49470D

uncharacterized LOC102585780

uncharacterized LOC102586117

hypothetical protein

uncharacterized LOC107813122

uncharacterized LOC107816711

uncharacterized LOC107823148

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	2
sbi00730	Thiamine metabolism	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4
sbi00510	N-Glycan biosynthesis	3
sbi00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa00052	Galactose metabolism	2
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00905	Brassinosteroid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00905	Brassinosteroid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00600	Sphingolipid metabolism	2
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00591	Linoleic acid metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00670	One carbon pool by folate	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00750	Vitamin B6 metabolism	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	11
bra00020	Citrate cycle (TCA cycle)	3
bra01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	3
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3
ghi04626	Plant-pathogen interaction	3
ghi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00790	Folate biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00270	Cysteine and methionine metabolism	2
sot00470	D-Amino acid metabolism	2
sot00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	5
nta00906	Carotenoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

8054983

8085745

100278440

113604965

4347738

4335218

123051271

123187232

123424515

123400205

100839255

100834992

838611

843933

100527484

100500267

113001852

101265345

101254074

103872819

103832046

103852999

100854733

7493994

25480899

120577444

107938107

106421577

111206407

106347082

102585780

102586117

102618693

107813122

107816711

107823148

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	2	2	2	2	2	2	3	2	3	1	1	2	1	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8054983 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8054983 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**