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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8055347   probable prolyl 4-hydroxylase 3 
 sbi-r.1   8065808   probable prolyl 4-hydroxylase 3 
 zma-u.5   100303994   prolyl 4-hydroxylase alpha-2 subunit 
 zma-u.5   100193348   prolyl 4-hydroxylase 1 
 osa-u.5   4331220   probable prolyl 4-hydroxylase 3 
 osa-u.5   4349012   probable prolyl 4-hydroxylase 3 
 tae-r.2   123047415   probable prolyl 4-hydroxylase 3 
 tae-r.2   123122757   probable prolyl 4-hydroxylase 3 
 tae-r.2   123135208   probable prolyl 4-hydroxylase 3 
 hvu-r.1   123406152   probable prolyl 4-hydroxylase 3 
 hvu-r.1   123432846   probable prolyl 4-hydroxylase 3 
 bdi-r.1   100835342   probable prolyl 4-hydroxylase 3 
 bdi-r.1   100835020   probable prolyl 4-hydroxylase 3 
 ath-u.5   P4H5   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-u.5   AT5G66060   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 gma-u.5   100798201   probable prolyl 4-hydroxylase 3 
 gma-u.5   100527885   probable prolyl 4-hydroxylase 10 
 gma-u.5   100818586   probable prolyl 4-hydroxylase 3 
 sly-u.5   101246711   probable prolyl 4-hydroxylase 3 
 sly-u.5   101267095   probable prolyl 4-hydroxylase 10 
 sly-u.5   101245118   probable prolyl 4-hydroxylase 10 
 bra-r.6   103874104   prolyl 4-hydroxylase 5 
 bra-r.6   103835803   probable prolyl 4-hydroxylase 3 
 bra-r.6   103872941   probable prolyl 4-hydroxylase 3 
 vvi-u.5   100252286   probable prolyl 4-hydroxylase 10 
 vvi-u.5   100252283   probable prolyl 4-hydroxylase 3 
 ppo-u.5   18096083   probable prolyl 4-hydroxylase 3 
 ppo-u.5   18099132   probable prolyl 4-hydroxylase 10 
 ppo-u.5   18101055   probable prolyl 4-hydroxylase 10 
 mtr-u.5   11439917   probable prolyl 4-hydroxylase 3 
 mtr-u.5   11420577   probable prolyl 4-hydroxylase 10 
 ghi-r.1   107910698   probable prolyl 4-hydroxylase 3 
 ghi-r.1   107912854   probable prolyl 4-hydroxylase 10 
 ghi-r.1   107937571   probable prolyl 4-hydroxylase 3 
 bna-r.1   125575158   prolyl 4-hydroxylase 5 
 bna-r.1   106392244   probable prolyl 4-hydroxylase 10 
 bna-r.1   106347086   probable prolyl 4-hydroxylase 3 
 sot-r.1   102580816   probable prolyl 4-hydroxylase 3 
 sot-r.1   102605813   probable prolyl 4-hydroxylase 10 
 sot-r.1   102579923   probable prolyl 4-hydroxylase 10 
 cit-r.1   102615950   probable prolyl 4-hydroxylase 10 
 cit-r.1   102628780   probable prolyl 4-hydroxylase 3 
 nta-r.1   107798883   putative prolyl 4-hydroxylase 10 
 nta-r.1   107807436   putative prolyl 4-hydroxylase 10 
 nta-r.1   107827856   putative prolyl 4-hydroxylase 10 

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Top 50 coexpressed genes to 8055347 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8055347 (sbi-r.1 coexpression data)

CoexMap"8055347"


sbiLOC8055347 | Entrez gene ID : 8055347      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 2 2 3 2 2 2 3 3 3 2 3 2 3 3 3 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00330 [list] [network] Arginine and proline metabolism (57 genes)
GO BP
GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline  (11 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (492 genes)  IEA  
GO MF
GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity  (11 genes)  IEA  
GO:0031418 [list] [network] L-ascorbic acid binding  (13 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (411 genes)  IEA  
Protein XP_002453082.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 2,  mito_plas 2,  nucl 1,  golg 1  (predict for XP_002453082.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_002453082.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8055347
sbi-r.1
for
8065808
zma-u.5
for
100303994
zma-u.5
for
100193348
osa-u.5
for
4331220
osa-u.5
for
4349012
tae-r.2
for
123047415
tae-r.2
for
123122757
tae-r.2
for
123135208
hvu-r.1
for
123406152
hvu-r.1
for
123432846
bdi-r.1
for
100835342
bdi-r.1
for
100835020
ath-u.5
for
P4H5
ath-u.5
for
AT5G66060
gma-u.5
for
100798201
gma-u.5
for
100527885
gma-u.5
for
100818586
sly-u.5
for
101246711
sly-u.5
for
101267095
sly-u.5
for
101245118
bra-r.6
for
103874104
bra-r.6
for
103835803
bra-r.6
for
103872941
vvi-u.5
for
100252286
vvi-u.5
for
100252283
ppo-u.5
for
18096083
ppo-u.5
for
18099132
ppo-u.5
for
18101055
mtr-u.5
for
11439917
mtr-u.5
for
11420577
ghi-r.1
for
107910698
ghi-r.1
for
107912854
ghi-r.1
for
107937571
bna-r.1
for
125575158
bna-r.1
for
106392244
bna-r.1
for
106347086
sot-r.1
for
102580816
sot-r.1
for
102605813
sot-r.1
for
102579923
cit-r.1
for
102615950
cit-r.1
for
102628780
nta-r.1
for
107798883
nta-r.1
for
107807436
nta-r.1
for
107827856


Ortholog ID: 1835
Species sbi sbi zma zma osa osa tae tae tae hvu hvu bdi bdi ath ath gma gma gma sly sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta
Symbol LOC8055347 LOC8065808 LOC100303994 LOC100193348 LOC4331220 LOC4349012 LOC123122757 LOC123146290 LOC123129127 LOC123406152 LOC123432846 LOC100835342 LOC100835020 P4H5 AT5G66060 LOC100527885 LOC100818586 LOC100806046 LOC101246711 LOC101267095 LOC101245118 LOC103874104 LOC103835803 LOC103845927 LOC100252286 LOC100252283 LOC18099132 LOC18101055 LOC7485620 LOC11439917 LOC11420577 LOC107910698 LOC107937571 LOC107905546 LOC106347086 LOC106366330 LOC106440743 LOC102580816 LOC102605813 LOC102579923 LOC102615950 LOC102628780 LOC107798883 LOC107769895 LOC107786638
Function* probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 prolyl 4-hydroxylase alpha-2 subunit prolyl 4-hydroxylase 1 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 prolyl 4-hydroxylase subunit alpha-1-like probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 10 prolyl 4-hydroxylase 5 probable prolyl 4-hydroxylase 3 prolyl 4-hydroxylase 5 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 putative prolyl 4-hydroxylase 10 putative prolyl 4-hydroxylase 10 putative prolyl 4-hydroxylase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 4
zma01212 Fatty acid metabolism 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00513 Various types of N-glycan biosynthesis 3
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 8
tae01230 Biosynthesis of amino acids 8
tae00710 Carbon fixation by Calvin cycle 7
tae00220 Arginine biosynthesis 6
tae00250 Alanine, aspartate and glutamate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 17
tae01230 Biosynthesis of amino acids 17
tae00710 Carbon fixation by Calvin cycle 14
tae00010 Glycolysis / Gluconeogenesis 11
tae00220 Arginine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 6
bdi04626 Plant-pathogen interaction 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi01230 Biosynthesis of amino acids 6
bdi00010 Glycolysis / Gluconeogenesis 4
bdi00330 Arginine and proline metabolism 3
bdi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00020 Citrate cycle (TCA cycle) 4
ath01200 Carbon metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath01230 Biosynthesis of amino acids 3
ath00514 Other types of O-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04626 Plant-pathogen interaction 4
gma00513 Various types of N-glycan biosynthesis 3
gma00330 Arginine and proline metabolism 2
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma00020 Citrate cycle (TCA cycle) 3
gma01200 Carbon metabolism 3
gma00330 Arginine and proline metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 4
sly00030 Pentose phosphate pathway 2
sly00051 Fructose and mannose metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly00330 Arginine and proline metabolism 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 5
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00330 Arginine and proline metabolism 3
bra00020 Citrate cycle (TCA cycle) 3
bra00640 Propanoate metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00330 Arginine and proline metabolism 3
bra04626 Plant-pathogen interaction 2
bra00640 Propanoate metabolism 2
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi01250 Biosynthesis of nucleotide sugars 3
vvi04626 Plant-pathogen interaction 3
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 4
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00330 Arginine and proline metabolism 3
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00330 Arginine and proline metabolism 3
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr03060 Protein export 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr00510 N-Glycan biosynthesis 3
mtr00513 Various types of N-glycan biosynthesis 3
mtr00330 Arginine and proline metabolism 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 7
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 7
ghi00330 Arginine and proline metabolism 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 6
ghi00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot01230 Biosynthesis of amino acids 7
sot00010 Glycolysis / Gluconeogenesis 6
sot00030 Pentose phosphate pathway 5
sot00051 Fructose and mannose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 4
cit01200 Carbon metabolism 4
cit01230 Biosynthesis of amino acids 4
cit00051 Fructose and mannose metabolism 3
cit00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta04130 SNARE interactions in vesicular transport 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8055347 8065808 100303994 100193348 4331220 4349012 123122757 123146290 123129127 123406152 123432846 100835342 100835020 816281 836738 100527885 100818586 100806046 101246711 101267095 101245118 103874104 103835803 103845927 100252286 100252283 18099132 18101055 7485620 11439917 11420577 107910698 107937571 107905546 106347086 106366330 106440743 102580816 102605813 102579923 102615950 102628780 107798883 107769895 107786638
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