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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8056033   UPF0426 protein At1g28150, chloroplastic 
 zma-u.5   100276454   UPF0426 protein chloroplastic 
 osa-u.5   4336466   UPF0426 protein At1g28150, chloroplastic 
 tae-r.2   123189829   UPF0426 protein At1g28150, chloroplastic 
 tae-r.2   123053936   UPF0426 protein At1g28150, chloroplastic 
 tae-r.2   123046052   UPF0426 protein At1g28150, chloroplastic 
 hvu-r.1   123427307   UPF0426 protein At1g28150, chloroplastic 
 bdi-r.1   100830997   UPF0426 protein At1g28150, chloroplastic 
 ath-u.5   AT1G28150   uncharacterized protein 
 gma-u.5   100779742   UPF0426 protein At1g28150, chloroplastic 
 gma-u.5   100500510   uncharacterized LOC100500510 
 sly-u.5   101252850   UPF0426 protein At1g28150, chloroplastic 
 bra-r.6   103838982   UPF0426 protein At1g28150, chloroplastic 
 bra-r.6   103829029   UPF0426 protein At1g28150, chloroplastic 
 vvi-u.5   100264935   UPF0426 protein At1g28150, chloroplastic 
 ppo-u.5   18097520   UPF0426 protein At1g28150, chloroplastic 
 mtr-u.5   25484543   UPF0426 protein At1g28150, chloroplastic 
 ghi-r.1   107953545   UPF0426 protein At1g28150, chloroplastic 
 ghi-r.1   107926610   UPF0426 protein At1g28150, chloroplastic 
 bna-r.1   106417683   UPF0426 protein At1g28150, chloroplastic 
 bna-r.1   106396395   UPF0426 protein At1g28150, chloroplastic-like 
 bna-r.1   106358053   UPF0426 protein At1g28150, chloroplastic 
 sot-r.1   102605196   UPF0426 protein At1g28150, chloroplastic 
 cit-r.1   102626307   UPF0426 protein At1g28150, chloroplastic 
 nta-r.1   107802677   UPF0426 protein At1g28150, chloroplastic 
 cre-r.1   CHLRE_03g203800v5   uncharacterized protein 

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Top 50 coexpressed genes to 8056033 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8056033 (sbi-r.1 coexpression data)

CoexMap"8056033"


sbiLOC8056033 | Entrez gene ID : 8056033    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 2 1 1 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_021318114.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_021318114.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_021318114.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8056033
zma-u.5
for
100276454
osa-u.5
for
4336466
tae-r.2
for
123189829
tae-r.2
for
123053936
tae-r.2
for
123046052
hvu-r.1
for
123427307
bdi-r.1
for
100830997
ath-u.5
for
AT1G28150
gma-u.5
for
100779742
gma-u.5
for
100500510
sly-u.5
for
101252850
bra-r.6
for
103838982
bra-r.6
for
103829029
vvi-u.5
for
100264935
ppo-u.5
for
18097520
mtr-u.5
for
25484543
ghi-r.1
for
107953545
ghi-r.1
for
107926610
bna-r.1
for
106417683
bna-r.1
for
106396395
bna-r.1
for
106358053
sot-r.1
for
102605196
cit-r.1
for
102626307
nta-r.1
for
107802677
cre-r.1
for
CHLRE_03g203800v5


Ortholog ID: 9811
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta cre
Symbol LOC8056033 LOC100276454 LOC4336466 LOC123189829 LOC123053936 LOC123046052 LOC123427307 LOC100830997 AT1G28150 LOC100779742 LOC100500510 LOC101252850 LOC103838982 LOC103829029 LOC100264935 LOC18097520 LOC25484543 LOC107953545 LOC107926610 LOC106417683 LOC106396395 LOC106358053 LOC102605196 LOC102626307 LOC107802677 CHLRE_03g203800v5
Function* UPF0426 protein At1g28150, chloroplastic UPF0426 protein chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic uncharacterized protein UPF0426 protein At1g28150, chloroplastic uncharacterized LOC100500510 UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic-like UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic UPF0426 protein At1g28150, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 2
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
bra00750 Vitamin B6 metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
cre03040 Spliceosome 2
cre00230 Purine metabolism 2
cre00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8056033 100276454 4336466 123189829 123053936 123046052 123427307 100830997 839709 100779742 100500510 101252850 103838982 103829029 100264935 18097520 25484543 107953545 107926610 106417683 106396395 106358053 102605196 102626307 107802677 5718880
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