ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8056100	selenoprotein F
zma-u.5	100282317	uncharacterized LOC100282317
osa-u.5	4324963	uncharacterized LOC4324963
tae-r.2	123080072	selenoprotein F
tae-r.2	123062885	selenoprotein F
tae-r.2	123071742	selenoprotein F
hvu-r.1	123445074	selenoprotein F
bdi-r.1	100839077	selenoprotein F
ath-u.5	AT1G05720	selenoprotein family protein
gma-u.5	100812667	selenoprotein F
gma-u.5	100808667	15 kDa selenoprotein-like
sly-u.5	101245367	selenoprotein family protein
bra-r.6	103836514	15 kDa selenoprotein
bra-r.6	103843593	selenoprotein F
vvi-u.5	100266214	uncharacterized LOC100266214
ppo-u.5	18104589	uncharacterized LOC18104589
ppo-u.5	7494621	uncharacterized LOC7494621
mtr-u.5	11445246	selenoprotein F
ghi-r.1	107903826	selenoprotein F
ghi-r.1	107957237	selenoprotein F
bna-r.1	106365685	selenoprotein F
bna-r.1	106419829	selenoprotein F-like
bna-r.1	125591404	selenoprotein F-like
sot-r.1	102601272	15 kDa selenoprotein
cit-r.1	102622669	uncharacterized LOC102622669
nta-r.1	107825049	uncharacterized LOC107825049
cre-r.1	CHLRE_01g038950v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005788 [list] [network] endoplasmic reticulum lumen

(11 genes)

IEA

GO MF

GO:0016491 [list] [network] oxidoreductase activity

(1434 genes)

IEA

Protein

XP_002456773.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, vacu 4, E.R. 1, chlo 1, nucl 1, E.R._plas 1, cyto_E.R. 1

(predict for XP_002456773.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_002456773.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8056100	zma-u.5 for 100282317	osa-u.5 for 4324963	tae-r.2 for 123080072	tae-r.2 for 123062885	tae-r.2 for 123071742	hvu-r.1 for 123445074	bdi-r.1 for 100839077	ath-u.5 for AT1G05720	gma-u.5 for 100812667	gma-u.5 for 100808667	sly-u.5 for 101245367	bra-r.6 for 103836514	bra-r.6 for 103843593	vvi-u.5 for 100266214	ppo-u.5 for 18104589	ppo-u.5 for 7494621	mtr-u.5 for 11445246	ghi-r.1 for 107903826	ghi-r.1 for 107957237	bna-r.1 for 106365685	bna-r.1 for 106419829	bna-r.1 for 125591404	sot-r.1 for 102601272	cit-r.1 for 102622669	nta-r.1 for 107825049	cre-r.1 for CHLRE_01g038950v5

Ortholog

Ortholog ID: 8679

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

selenoprotein F

uncharacterized LOC100282317

uncharacterized LOC4324963

selenoprotein F

selenoprotein family protein

selenoprotein F

15 kDa selenoprotein-like

selenoprotein family protein

15 kDa selenoprotein

selenoprotein F

uncharacterized LOC100266214

uncharacterized LOC18104589

uncharacterized LOC7494621

selenoprotein F

selenoprotein F-like

15 kDa selenoprotein

uncharacterized LOC102622669

uncharacterized LOC107825049

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2
osa04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5
tae03083	Polycomb repressive complex	2
tae04120	Ubiquitin mediated proteolysis	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	4
tae00513	Various types of N-glycan biosynthesis	4
tae04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi03050	Proteasome	2
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	4
ath03060	Protein export	3
ath00510	N-Glycan biosynthesis	3
ath00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma03010	Ribosome	3
gma03050	Proteasome	3
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	8
sly03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	3
bra04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	4
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04070	Phosphatidylinositol signaling system	4
bna04075	Plant hormone signal transduction	4
bna04626	Plant-pathogen interaction	4
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	5
bna04070	Phosphatidylinositol signaling system	5
bna04075	Plant hormone signal transduction	5
bna04626	Plant-pathogen interaction	5
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	5
bna04070	Phosphatidylinositol signaling system	5
bna04075	Plant hormone signal transduction	5
bna04626	Plant-pathogen interaction	5
bna04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	5
sot03060	Protein export	2
sot00510	N-Glycan biosynthesis	2
sot00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	2
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2
nta04148	Efferocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

8056100

100282317

4324963

123080072

123062885

123071742

123445074

100839077

837079

100812667

100808667

101245367

103836514

103843593

100266214

18104589

7494621

11445246

107903826

107957237

106365685

106419829

125591404

102601272

102622669

107825049

5715525

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8056100 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8056100 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	1	1	3	1	1	1	2	1	2	1	2	1	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8056100 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8056100 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**