ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8056198	putative endo-1,3(4)-beta-glucanase 2
sbi-r.1	8068382	putative endo-1,3(4)-beta-glucanase 2
zma-u.5	100216714	glycosyl hydrolase family 81 protein
zma-u.5	103638141	putative endo-1,3(4)-beta-glucanase 2
osa-u.5	4346925	glucan endo-1,3-beta-D-glucosidase
tae-r.2	123103642	probable endo-1,3(4)-beta-glucanase ARB_01444
tae-r.2	123111852	probable endo-1,3(4)-beta-glucanase ARB_01444
hvu-r.1	123395692	probable endo-1,3(4)-beta-glucanase ARB_01444
bdi-r.1	100846458	putative endo-1,3(4)-beta-glucanase 2
ath-u.5	AT5G15870	glycosyl hydrolase family 81 protein
gma-u.5	100819911	probable endo-1,3(4)-beta-glucanase ARB_01444
gma-u.5	100819378	probable endo-1,3(4)-beta-glucanase ARB_01444
sly-u.5	101265981	glucan endo-1,3-beta-D-glucosidase-like
sly-u.5	101257148	glucan endo-1,3-beta-D-glucosidase
sly-u.5	101265693	glucan endo-1,3-beta-D-glucosidase
bra-r.6	103851012	probable endo-1,3(4)-beta-glucanase ARB_01444
bra-r.6	103872595	probable endo-1,3(4)-beta-glucanase ARB_01444
bra-r.6	103846376	probable endo-1,3(4)-beta-glucanase ARB_01444
vvi-u.5	100251569	glucan endo-1,3-beta-D-glucosidase ARB_01444-like
vvi-u.5	100261655	ascus wall glucan endo-1,3-beta-D-glucosidase
ppo-u.5	7494561	probable endo-1,3(4)-beta-glucanase ARB_01444
mtr-u.5	25497519	probable endo-1,3(4)-beta-glucanase ARB_01444
mtr-u.5	25495545	probable endo-1,3(4)-beta-glucanase ARB_01444
mtr-u.5	11417855	probable endo-1,3(4)-beta-glucanase ARB_01444
ghi-r.1	107953955	probable endo-1,3(4)-beta-glucanase ARB_01444
ghi-r.1	107934228	probable endo-1,3(4)-beta-glucanase ARB_01444
bna-r.1	106424742	probable endo-1,3(4)-beta-glucanase ARB_01444
bna-r.1	106372183	probable endo-1,3(4)-beta-glucanase ARB_01444
sot-r.1	102585857	putative endo-1,3(4)-beta-glucanase 2
sot-r.1	102585521	endo-1,3(4)-beta-glucanase 1-like
sot-r.1	102583519	putative endo-1,3(4)-beta-glucanase 2
cit-r.1	102627960	probable endo-1,3(4)-beta-glucanase ARB_01444
nta-r.1	107777520	glucan endo-1,3-beta-D-glucosidase-like
nta-r.1	107824319	glucan endo-1,3-beta-D-glucosidase
nta-r.1	107806871	glucan endo-1,3-beta-D-glucosidase-like
cre-r.1	CHLRE_12g513400v5	uncharacterized protein

Top 50 coexpressed genes to 8056198 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8056198 (sbi-r.1 coexpression data)

CoexMap"8056198"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0052861 [list] [network] endo-1,3(4)-beta-glucanase activity

(2 genes)

IEA

Protein

XP_021309879.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo_mito 5, chlo 3

(predict for XP_021309879.1)

Subcellular
localization
TargetP

mito 6, chlo 3

(predict for XP_021309879.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8056198	sbi-r.1 for 8068382	zma-u.5 for 100216714	zma-u.5 for 103638141	osa-u.5 for 4346925	tae-r.2 for 123103642	tae-r.2 for 123111852	hvu-r.1 for 123395692	bdi-r.1 for 100846458	ath-u.5 for AT5G15870	gma-u.5 for 100819911	gma-u.5 for 100819378	sly-u.5 for 101265981	sly-u.5 for 101257148	sly-u.5 for 101265693	bra-r.6 for 103851012	bra-r.6 for 103872595	bra-r.6 for 103846376	vvi-u.5 for 100251569	vvi-u.5 for 100261655	ppo-u.5 for 7494561	mtr-u.5 for 25497519	mtr-u.5 for 25495545	mtr-u.5 for 11417855	ghi-r.1 for 107953955	ghi-r.1 for 107934228	bna-r.1 for 106424742	bna-r.1 for 106372183	sot-r.1 for 102585857	sot-r.1 for 102585521	sot-r.1 for 102583519	cit-r.1 for 102627960	nta-r.1 for 107777520	nta-r.1 for 107824319	nta-r.1 for 107806871	cre-r.1 for CHLRE_12g513400v5

Ortholog

Ortholog ID: 2238

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

putative endo-1,3(4)-beta-glucanase 2

glycosyl hydrolase family 81 protein

putative endo-1,3(4)-beta-glucanase 2

glucan endo-1,3-beta-D-glucosidase

probable endo-1,3(4)-beta-glucanase ARB_01444

putative endo-1,3(4)-beta-glucanase 2

glycosyl hydrolase family 81 protein

probable endo-1,3(4)-beta-glucanase ARB_01444

uncharacterized LOC102665234

glucan endo-1,3-beta-D-glucosidase-like

glucan endo-1,3-beta-D-glucosidase

probable endo-1,3(4)-beta-glucanase ARB_01444

glucan endo-1,3-beta-D-glucosidase ARB_01444-like

ascus wall glucan endo-1,3-beta-D-glucosidase

probable endo-1,3(4)-beta-glucanase ARB_01444

putative endo-1,3(4)-beta-glucanase 2

endo-1,3(4)-beta-glucanase 1-like

putative endo-1,3(4)-beta-glucanase 2

probable endo-1,3(4)-beta-glucanase ARB_01444

glucan endo-1,3-beta-D-glucosidase-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	5
gma00020	Citrate cycle (TCA cycle)	3
gma01230	Biosynthesis of amino acids	3
gma00030	Pentose phosphate pathway	3
gma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00053	Ascorbate and aldarate metabolism	2
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01240	Biosynthesis of cofactors	2
vvi01250	Biosynthesis of nucleotide sugars	2
vvi00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2
vvi01240	Biosynthesis of cofactors	2
vvi00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	2
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2
mtr00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00100	Steroid biosynthesis	5
bna00561	Glycerolipid metabolism	5
bna00564	Glycerophospholipid metabolism	5
bna00565	Ether lipid metabolism	5
bna00590	Arachidonic acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	4
sot04016	MAPK signaling pathway - plant	2
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta04517	IgSF CAM signaling	2
nta04620	Toll-like receptor signaling pathway	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

8056198

8068382

100216714

103638141

4346925

123103642

123121419

123395692

100846458

831444

100810004

100796721

102665234

101265981

101257148

101265693

103851012

103872595

103846376

100251569

100261655

7494561

25495552

25496128

25495554

107953955

107934228

106372183

102585857

102585521

102583519

102627960

107806871

107801019

107799688

5728534

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	2	1	2	1	1	1	2	3	3	2	1	3	2	2	3	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8056198 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8056198 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**