ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8057103	remorin 4.1
sbi-r.1	8083897	remorin 4.1
zma-u.5	100284456	uncharacterized LOC100284456
zma-u.5	100273279	uncharacterized LOC100273279
zma-u.5	100192691	Remorin family protein
osa-u.5	4343649	remorin 4.1-like
osa-u.5	4334517	remorin 4.1-like
osa-u.5	4342700	remorin 4.1-like
tae-r.2	123052359	remorin 4.1
tae-r.2	123105586	remorin 4.1
tae-r.2	123113896	remorin 4.1
hvu-r.1	123452929	remorin 4.1-like
hvu-r.1	123425647	remorin 4.1-like
hvu-r.1	123407499	remorin 4.1-like
bdi-r.1	100829682	remorin 4.1
bdi-r.1	100841799	remorin 4.1
bdi-r.1	100837456	remorin 4.1
ath-u.5	AT2G41870	Remorin family protein
ath-u.5	AT3G57540	Remorin family protein
gma-u.5	100802874	remorin 4.2
gma-u.5	100784687	remorin 4.2
sly-u.5	101257912	remorin 4.2
sly-u.5	101248091	remorin 4.2-like
bra-r.6	103866596	remorin 4.2
bra-r.6	103841659	remorin 4.1
vvi-u.5	104880107	remorin 4.1
ppo-u.5	7496140	remorin 4.1
ppo-u.5	7484011	remorin 4.2
mtr-u.5	25483410	remorin 4.2
mtr-u.5	11428187	remorin 4.2
ghi-r.1	107922698	remorin 4.2
ghi-r.1	107924826	remorin 4.2
ghi-r.1	107925705	remorin 4.2
bna-r.1	106411906	remorin 4.1-like
bna-r.1	125585017	remorin 4.2-like
bna-r.1	106368205	remorin 4.1-like
sot-r.1	102588911	ras guanine nucleotide exchange factor P
sot-r.1	102583746	myb-like protein D
cit-r.1	102621333	remorin 4.2-like
nta-r.1	107800898	remorin 4.1-like
nta-r.1	107788067	remorin 4.2-like
nta-r.1	107804321	remorin 4.2-like

Top 50 coexpressed genes to 8057103 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8057103 (sbi-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

remorin 4.1

KEGG

GO BP

GO CC

GO MF

Protein

XP_002463686.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, chlo 1, plas 1

(predict for XP_002463686.1)

Subcellular
localization
TargetP

chlo 6, other 4

(predict for XP_002463686.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8057103	sbi-r.1 for 8083897	zma-u.5 for 100284456	zma-u.5 for 100273279	zma-u.5 for 100192691	osa-u.5 for 4343649	osa-u.5 for 4334517	osa-u.5 for 4342700	tae-r.2 for 123052359	tae-r.2 for 123105586	tae-r.2 for 123113896	hvu-r.1 for 123452929	hvu-r.1 for 123425647	hvu-r.1 for 123407499	bdi-r.1 for 100829682	bdi-r.1 for 100841799	bdi-r.1 for 100837456	ath-u.5 for AT2G41870	ath-u.5 for AT3G57540	gma-u.5 for 100802874	gma-u.5 for 100784687	sly-u.5 for 101257912	sly-u.5 for 101248091	bra-r.6 for 103866596	bra-r.6 for 103841659	vvi-u.5 for 104880107	ppo-u.5 for 7496140	ppo-u.5 for 7484011	mtr-u.5 for 25483410	mtr-u.5 for 11428187	ghi-r.1 for 107922698	ghi-r.1 for 107924826	ghi-r.1 for 107925705	bna-r.1 for 106411906	bna-r.1 for 125585017	bna-r.1 for 106368205	sot-r.1 for 102588911	sot-r.1 for 102583746	cit-r.1 for 102621333	nta-r.1 for 107800898	nta-r.1 for 107788067	nta-r.1 for 107804321

Please wait a moment.

Ortholog

Ortholog ID: 3214

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

remorin 4.1

uncharacterized LOC100284456

uncharacterized LOC100273279

Remorin family protein

remorin 4.1-like

remorin 4.1

remorin 4.1-like

remorin 4.1

Remorin family protein

remorin 4.2

Remorin_C superfamily protein

remorin 4.2

remorin 4.2-like

remorin 4.2

remorin 4.1

remorin 4.2

remorin 4.1-like

remorin 4.2-like

remorin 4.1-like

ras guanine nucleotide exchange factor P

myb-like protein D

remorin 4.2-like

remorin 4.1-like

remorin 4.2-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3
sbi04016	MAPK signaling pathway - plant	2
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	3
zma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	2
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00290	Valine, leucine and isoleucine biosynthesis	2
gma00650	Butanoate metabolism	2
gma00660	C5-Branched dibasic acid metabolism	2
gma00770	Pantothenate and CoA biosynthesis	2
gma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01230	Biosynthesis of amino acids	6
gma00290	Valine, leucine and isoleucine biosynthesis	5
gma00660	C5-Branched dibasic acid metabolism	5
gma01210	2-Oxocarboxylic acid metabolism	5
gma00650	Butanoate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01240	Biosynthesis of cofactors	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	7
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4
bra04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	6
vvi04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	4
ppo04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	9
sot04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	5
sot04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2
nta00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2
nta00564	Glycerophospholipid metabolism	2
nta00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8057103

8083897

100284456

100273279

100192691

4343649

4334517

4342700

123052359

123105586

123161157

123452929

123425647

123407499

100829682

100841799

100837456

818787

824921

100802874

100784687

100527684

101257912

101248091

103866596

103841659

104880107

7496140

7484011

25483410

11428187

107922698

107924826

107925705

106411906

125585017

106368205

102588911

102583746

102621333

107800898

107788067

107828324

The preparation time of this page was 0.2 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	3	3	3	3	2	2	2	2	1	2	2	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8057103 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8057103 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**