ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8059000	putidaredoxin
zma-u.5	100284188	uncharacterized LOC100284188
zma-u.5	100284586	uncharacterized LOC100284586
osa-u.5	4347568	uncharacterized LOC4347568
tae-r.2	123104413	rhodocoxin
tae-r.2	123112682	rhodocoxin
tae-r.2	123122174	rhodocoxin
hvu-r.1	123399888	rhodocoxin
bdi-r.1	100830876	rhodocoxin
ath-u.5	AT3G07480	2Fe-2S ferredoxin-like superfamily protein
gma-u.5	106797183	rhodocoxin
gma-u.5	100801962	rhodocoxin
sly-u.5	101258765	uncharacterized LOC101258765
sly-u.5	101252187	uncharacterized LOC101252187
bra-r.6	103870666	2Fe-2S ferredoxin
vvi-u.5	100854844	uncharacterized LOC100854844
ppo-u.5	7462454	uncharacterized LOC7462454
ppo-u.5	7463374	uncharacterized LOC7463374
mtr-u.5	11435762	rhodocoxin
ghi-r.1	121209786	ferredoxin-2, mitochondrial
ghi-r.1	107910960	ferredoxin-2, mitochondrial
ghi-r.1	107954979	ferredoxin-2, mitochondrial
bna-r.1	106402098	2Fe-2S ferredoxin-like
bna-r.1	106452926	2Fe-2S ferredoxin
sot-r.1	102594547	putidaredoxin-like
sot-r.1	102586026	rhodocoxin
cit-r.1	102620878	uncharacterized LOC102620878
nta-r.1	107813305	uncharacterized LOC107813305
nta-r.1	107768928	uncharacterized LOC107768928
nta-r.1	107767508	uncharacterized LOC107767508
cre-r.1	CHLRE_02g100200v5	uncharacterized protein

Top 50 coexpressed genes to 8059000 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8059000 (sbi-r.1 coexpression data)

CoexMap"8059000"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0140647 [list] [network] P450-containing electron transport chain

(5 genes)

IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(539 genes)

IEA

GO MF

GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding

(42 genes)

IEA

Protein

XP_002462658.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 3

(predict for XP_002462658.1)

Subcellular
localization
TargetP

mito 6, chlo 5

(predict for XP_002462658.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8059000	zma-u.5 for 100284188	zma-u.5 for 100284586	osa-u.5 for 4347568	tae-r.2 for 123104413	tae-r.2 for 123112682	tae-r.2 for 123122174	hvu-r.1 for 123399888	bdi-r.1 for 100830876	ath-u.5 for AT3G07480	gma-u.5 for 106797183	gma-u.5 for 100801962	sly-u.5 for 101258765	sly-u.5 for 101252187	bra-r.6 for 103870666	vvi-u.5 for 100854844	ppo-u.5 for 7462454	ppo-u.5 for 7463374	mtr-u.5 for 11435762	ghi-r.1 for 121209786	ghi-r.1 for 107910960	ghi-r.1 for 107954979	bna-r.1 for 106402098	bna-r.1 for 106452926	sot-r.1 for 102594547	sot-r.1 for 102586026	cit-r.1 for 102620878	nta-r.1 for 107813305	nta-r.1 for 107768928	nta-r.1 for 107767508	cre-r.1 for CHLRE_02g100200v5

Ortholog

Ortholog ID: 6860

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

putidaredoxin

uncharacterized LOC100284188

uncharacterized LOC100284586

uncharacterized LOC4347568

rhodocoxin

2Fe-2S ferredoxin-like superfamily protein

rhodocoxin

uncharacterized LOC101258765

uncharacterized LOC101252187

2Fe-2S ferredoxin

uncharacterized LOC100854844

uncharacterized LOC7462454

uncharacterized LOC7463374

rhodocoxin

ferredoxin-2, mitochondrial

2Fe-2S ferredoxin-like

2Fe-2S ferredoxin

putidaredoxin-like

rhodocoxin

uncharacterized LOC102620878

uncharacterized LOC107813305

uncharacterized LOC107768928

uncharacterized LOC142171512

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4
zma03010	Ribosome	2
zma00510	N-Glycan biosynthesis	2
zma00513	Various types of N-glycan biosynthesis	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	3
tae00513	Various types of N-glycan biosynthesis	3
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	3
tae00513	Various types of N-glycan biosynthesis	3
tae04141	Protein processing in endoplasmic reticulum	3
tae00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	3
tae00513	Various types of N-glycan biosynthesis	3
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	4
gma00513	Various types of N-glycan biosynthesis	4
gma04141	Protein processing in endoplasmic reticulum	4
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	10
gma00020	Citrate cycle (TCA cycle)	3
gma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	8
mtr00020	Citrate cycle (TCA cycle)	3
mtr01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi00020	Citrate cycle (TCA cycle)	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi01200	Carbon metabolism	4
ghi00260	Glycine, serine and threonine metabolism	2
ghi00270	Cysteine and methionine metabolism	2
ghi00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi00020	Citrate cycle (TCA cycle)	2
ghi01200	Carbon metabolism	2
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00030	Pentose phosphate pathway	3
bna01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00030	Pentose phosphate pathway	2
bna01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3
cit00270	Cysteine and methionine metabolism	2
cit01230	Biosynthesis of amino acids	2
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	5
nta04148	Efferocytosis	4
nta03010	Ribosome	2
nta00071	Fatty acid degradation	2
nta00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	5
nta04148	Efferocytosis	4
nta00290	Valine, leucine and isoleucine biosynthesis	3
nta00660	C5-Branched dibasic acid metabolism	3
nta01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	9
nta04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	10
cre00010	Glycolysis / Gluconeogenesis	2
cre00020	Citrate cycle (TCA cycle)	2
cre00620	Pyruvate metabolism	2
cre00785	Lipoic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8059000

100284188

100284586

4347568

123104413

123112682

123122174

123399888

100830876

819936

106797183

100801962

101258765

101252187

103870666

100854844

7462454

7463374

11435762

121209786

107910960

107954979

106402098

106452926

102594547

102586026

102620878

107813305

107768928

142171512

5725570

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	2	1	3	1	1	1	2	2	1	1	2	1	3	2	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8059000 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8059000 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**