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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8059178   KRR1 small subunit processome component 
 zma-u.5   107521945   RNA-binding KH domain-containing protein 
 osa-u.5   4348775   KRR1 small subunit processome component homolog 
 tae-r.2   123078815   KRR1 small subunit processome component homolog 
 tae-r.2   123070363   KRR1 small subunit processome component homolog 
 tae-r.2   123061730   KRR1 small subunit processome component homolog 
 hvu-r.1   123444261   KRR1 small subunit processome component homolog 
 bdi-r.1   100845494   KRR1 small subunit processome component homolog 
 ath-u.5   AT5G08420   RNA-binding KH domain-containing protein 
 gma-u.5   100783800   KRR1 small subunit processome component homolog 
 gma-u.5   100816856   ribosomal RNA assembly protein mis3-like 
 sly-u.5   101259018   KRR1 small subunit processome component 
 bra-r.6   103850699   KRR1 small subunit processome component homolog 
 bra-r.6   103847151   KRR1 small subunit processome component homolog 
 vvi-u.5   100245609   KRR1 small subunit processome component homolog 
 ppo-u.5   7462572   KRR1 small subunit processome component 
 mtr-u.5   11435195   KRR1 small subunit processome component homolog 
 ghi-r.1   107951097   KRR1 small subunit processome component homolog 
 ghi-r.1   107910627   KRR1 small subunit processome component homolog 
 bna-r.1   106419335   KRR1 small subunit processome component homolog 
 bna-r.1   106402490   KRR1 small subunit processome component homolog 
 bna-r.1   106380535   KRR1 small subunit processome component homolog 
 sot-r.1   102598523   KRR1 small subunit processome component 
 cit-r.1   102616017   KRR1 small subunit processome component homolog 
 nta-r.1   107791487   KRR1 small subunit processome component 
 nta-r.1   107779317   KRR1 small subunit processome component-like 
 cre-r.1   CHLRE_12g508200v5   uncharacterized protein 

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Top 50 coexpressed genes to 8059178 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8059178 (sbi-r.1 coexpression data)

CoexMap"8059178"


sbiLOC8059178 | Entrez gene ID : 8059178    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 2 1 1 1 2 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0032040 [list] [network] small-subunit processome  (50 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (194 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021313709.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_021313709.1)
Subcellular
localization
TargetP
other 8  (predict for XP_021313709.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8059178
zma-u.5
for
107521945
osa-u.5
for
4348775
tae-r.2
for
123078815
tae-r.2
for
123070363
tae-r.2
for
123061730
hvu-r.1
for
123444261
bdi-r.1
for
100845494
ath-u.5
for
AT5G08420
gma-u.5
for
100783800
gma-u.5
for
100816856
sly-u.5
for
101259018
bra-r.6
for
103850699
bra-r.6
for
103847151
vvi-u.5
for
100245609
ppo-u.5
for
7462572
mtr-u.5
for
11435195
ghi-r.1
for
107951097
ghi-r.1
for
107910627
bna-r.1
for
106419335
bna-r.1
for
106402490
bna-r.1
for
106380535
sot-r.1
for
102598523
cit-r.1
for
102616017
nta-r.1
for
107791487
nta-r.1
for
107779317
cre-r.1
for
CHLRE_12g508200v5


Ortholog ID: 7706
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC8059178 LOC107521945 LOC4348775 LOC123078815 LOC123070363 LOC123061730 LOC123444261 LOC100845494 AT5G08420 LOC100783800 LOC100816856 LOC101259018 LOC103850699 LOC103847151 LOC100245609 LOC7462572 LOC11435195 LOC107951097 LOC107910627 LOC106419335 LOC106402490 LOC106396313 LOC102598523 LOC102616017 LOC107791487 LOC107779317 CHLRE_12g508200v5
Function* KRR1 small subunit processome component RNA-binding KH domain-containing protein KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog RNA-binding KH domain-containing protein KRR1 small subunit processome component homolog ribosomal RNA assembly protein mis3-like KRR1 small subunit processome component KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component KRR1 small subunit processome component homolog KRR1 small subunit processome component KRR1 small subunit processome component-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00450 Selenocompound metabolism 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra04141 Protein processing in endoplasmic reticulum 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8059178 107521945 4348775 123078815 123070363 123061730 123444261 100845494 830741 100783800 100816856 101259018 103850699 103847151 100245609 7462572 11435195 107951097 107910627 106419335 106402490 106396313 102598523 102616017 107791487 107779317 5716516
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