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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8059625   chromophore lyase CRL, chloroplastic 
 sbi-r.1   8064788   chromophore lyase CRL, chloroplastic 
 zma-u.5   100382707   uncharacterized LOC100382707 
 osa-u.5   4350611   chromophore lyase CRL, chloroplastic 
 tae-r.2   123092022   chromophore lyase CRL, chloroplastic 
 tae-r.2   123086054   chromophore lyase CRL, chloroplastic 
 hvu-r.1   123448554   chromophore lyase CRL, chloroplastic 
 bdi-r.1   100832692   chromophore lyase CRL, chloroplastic 
 ath-u.5   CRL   crumpled leaf 
 gma-u.5   100800615   chromophore lyase CRL, chloroplastic 
 gma-u.5   100796592   chromophore lyase CRL, chloroplastic 
 sly-u.5   101249651   chromophore lyase CRL, chloroplastic 
 bra-r.6   103862882   chromophore lyase CRL, chloroplastic 
 vvi-u.5   100264699   chromophore lyase CRL, chloroplastic 
 ppo-u.5   7484896   chromophore lyase CRL, chloroplastic 
 mtr-u.5   11425570   chromophore lyase CRL, chloroplastic 
 ghi-r.1   107912061   chromophore lyase CRL, chloroplastic 
 ghi-r.1   121209645   chromophore lyase CRL, chloroplastic 
 ghi-r.1   107886179   chromophore lyase CRL, chloroplastic 
 bna-r.1   106346559   chromophore lyase CRL, chloroplastic 
 bna-r.1   106442533   chromophore lyase CRL, chloroplastic 
 sot-r.1   102588453   chromophore lyase CRL, chloroplastic 
 cit-r.1   102620004   chromophore lyase CRL, chloroplastic 
 nta-r.1   107793916   chromophore lyase CRL, chloroplastic 
 nta-r.1   107760088   chromophore lyase CRL, chloroplastic 

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Top 50 coexpressed genes to 8059625 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8059625 (sbi-r.1 coexpression data)

CoexMap"8059625"


sbiLOC8059625 | Entrez gene ID : 8059625      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 2 1 1 1 2 1 1 1 1 1 3 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0017009 [list] [network] protein-phycocyanobilin linkage  (2 genes)  IEA  
GO CC
GO MF
GO:0016829 [list] [network] lyase activity  (260 genes)  IEA  
Protein XP_002453930.1 [sequence] [blastp]
XP_021316279.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 3,  chlo_mito 3  (predict for XP_002453930.1)
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_021316279.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002453930.1)
other 7  (predict for XP_021316279.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8059625
sbi-r.1
for
8064788
zma-u.5
for
100382707
osa-u.5
for
4350611
tae-r.2
for
123092022
tae-r.2
for
123086054
hvu-r.1
for
123448554
bdi-r.1
for
100832692
ath-u.5
for
CRL
gma-u.5
for
100800615
gma-u.5
for
100796592
sly-u.5
for
101249651
bra-r.6
for
103862882
vvi-u.5
for
100264699
ppo-u.5
for
7484896
mtr-u.5
for
11425570
ghi-r.1
for
107912061
ghi-r.1
for
121209645
ghi-r.1
for
107886179
bna-r.1
for
106346559
bna-r.1
for
106442533
sot-r.1
for
102588453
cit-r.1
for
102620004
nta-r.1
for
107793916
nta-r.1
for
107760088


Ortholog ID: 9729
Species sbi sbi zma osa tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC8059625 LOC8064788 LOC100382707 LOC4350611 LOC123092022 LOC123086054 LOC123448554 LOC100832692 CRL LOC100800615 LOC100796592 LOC101249651 LOC103862882 LOC100264699 LOC7484896 LOC11425570 LOC121209645 LOC107886179 LOC107949626 LOC106346559 LOC106442533 LOC102588453 LOC102620004 LOC107793916 LOC107760088
Function* chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic uncharacterized LOC100382707 chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic crumpled leaf chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic chromophore lyase CRL, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00670 One carbon pool by folate 4
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8059625 8064788 100382707 4350611 123092022 123086054 123448554 100832692 835175 100800615 100796592 101249651 103862882 100264699 7484896 11425570 121209645 107886179 107949626 106346559 106442533 102588453 102620004 107793916 107760088
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