ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8060733	low molecular mass early light-inducible protein HV90, chloroplastic
sbi-r.1	8081192	low molecular mass early light-inducible protein HV90, chloroplastic
zma-u.5	541918	early light-inducible protein ELIP
zma-u.5	100285817	early light-induced protein
osa-u.5	4342551	low molecular mass early light-inducible protein HV60, chloroplastic
osa-u.5	4326757	low molecular mass early light-inducible protein HV60, chloroplastic
tae-r.2	123112044	low molecular mass early light-inducible protein HV90, chloroplastic-like
tae-r.2	123112045	low molecular mass early light-inducible protein HV90, chloroplastic-like
tae-r.2	123112046	low molecular mass early light-inducible protein HV90, chloroplastic-like
hvu-r.1	123446769	high molecular mass early light-inducible protein HV58, chloroplastic-like
hvu-r.1	123399662	low molecular mass early light-inducible protein HV60, chloroplastic
hvu-r.1	123399661	low molecular mass early light-inducible protein HV90, chloroplastic-like
bdi-r.1	100839629	low molecular mass early light-inducible protein HV90, chloroplastic
bdi-r.1	100839329	low molecular mass early light-inducible protein HV90, chloroplastic
bdi-r.1	100839024	low molecular mass early light-inducible protein HV90, chloroplastic
ath-u.5	ELIP1	Chlorophyll A-B binding family protein
ath-u.5	ELIP2	Chlorophyll A-B binding family protein
gma-u.5	ELIP	early light-induced protein
gma-u.5	100306375	chlorophyll A-B binding protein
sly-u.5	ELIP	early light inducible protein
bra-r.6	103834289	early light-induced protein 1, chloroplastic
bra-r.6	103868967	early light-induced protein 1, chloroplastic
bra-r.6	103871843	early light-induced protein 2, chloroplastic
vvi-u.5	100263179	chloroplast ELIP early light-induced protein
ppo-u.5	18101574	early light-induced protein 1, chloroplastic
ppo-u.5	7473430	early light-induced protein 1, chloroplastic
mtr-u.5	25485134	early light-induced protein, chloroplastic
mtr-u.5	25485116	early light-induced protein, chloroplastic
mtr-u.5	25485138	early light-induced protein, chloroplastic
ghi-r.1	107928556	early light-induced protein 1, chloroplastic
ghi-r.1	107929077	early light-induced protein 1, chloroplastic
ghi-r.1	107928504	early light-induced protein 1, chloroplastic
bna-r.1	106416564	early light-induced protein 1, chloroplastic
bna-r.1	106436504	early light-induced protein 1, chloroplastic
bna-r.1	106372735	early light-induced protein 2, chloroplastic
sot-r.1	102598592	early light-induced protein, chloroplastic-like
cit-r.1	102578039	early light-induced protein 1, chloroplastic
cit-r.1	102626141	early light-induced protein 1, chloroplastic
nta-r.1	107824752	early light-induced protein, chloroplastic
nta-r.1	107823250	early light-induced protein 1, chloroplastic
nta-r.1	107800411	early light-induced protein, chloroplastic
cre-r.1	CHLRE_08g384650v5	uncharacterized protein
cre-r.1	CHLRE_14g626750v5	uncharacterized protein
cre-r.1	CHLRE_09g394325v5	uncharacterized protein

Top 50 coexpressed genes to 8060733 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8060733 (sbi-r.1 coexpression data)

CoexMap"8060733"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002461536.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, mito 2

(predict for XP_002461536.1)

Subcellular
localization
TargetP

chlo 6

(predict for XP_002461536.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8060733	sbi-r.1 for 8081192	zma-u.5 for 541918	zma-u.5 for 100285817	osa-u.5 for 4342551	osa-u.5 for 4326757	tae-r.2 for 123112044	tae-r.2 for 123112045	tae-r.2 for 123112046	hvu-r.1 for 123446769	hvu-r.1 for 123399662	hvu-r.1 for 123399661	bdi-r.1 for 100839629	bdi-r.1 for 100839329	bdi-r.1 for 100839024	ath-u.5 for ELIP1	ath-u.5 for ELIP2	gma-u.5 for ELIP	gma-u.5 for 100306375	sly-u.5 for ELIP	bra-r.6 for 103834289	bra-r.6 for 103868967	bra-r.6 for 103871843	vvi-u.5 for 100263179	ppo-u.5 for 18101574	ppo-u.5 for 7473430	mtr-u.5 for 25485134	mtr-u.5 for 25485116	mtr-u.5 for 25485138	ghi-r.1 for 107928556	ghi-r.1 for 107929077	ghi-r.1 for 107928504	bna-r.1 for 106416564	bna-r.1 for 106436504	bna-r.1 for 106372735	sot-r.1 for 102598592	cit-r.1 for 102578039	cit-r.1 for 102626141	nta-r.1 for 107824752	nta-r.1 for 107823250	nta-r.1 for 107800411	cre-r.1 for CHLRE_08g384650v5	cre-r.1 for CHLRE_14g626750v5	cre-r.1 for CHLRE_09g394325v5

Ortholog

Ortholog ID: 621

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

ELIP1

ELIP2

ELIP

ELIP

Function^*

low molecular mass early light-inducible protein HV90, chloroplastic

early light-inducible protein ELIP

early light-induced protein

low molecular mass early light-inducible protein HV60, chloroplastic

high molecular mass early light-inducible protein HV58, chloroplastic

low molecular mass early light-inducible protein HV90, chloroplastic-like

low molecular mass early light-inducible protein HV90, chloroplastic

high molecular mass early light-inducible protein HV58, chloroplastic

Chlorophyll A-B binding family protein

early light-induced protein

chlorophyll A-B binding protein

early light inducible protein