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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060985   NPL4-like protein 
 zma-u.5   100273080   uncharacterized LOC100273080 
 zma-u.5   100194136   NPL4 family 
 osa-u.5   4325451   NPL4-like protein 
 tae-r.2   123143925   NPL4-like protein 
 tae-r.2   123136417   NPL4-like protein 
 tae-r.2   123132365   NPL4-like protein 
 hvu-r.1   123402420   NPL4-like protein 
 bdi-r.1   100843046   NPL4-like protein 
 ath-u.5   AT2G47970   Nuclear pore localization protein NPL4 
 ath-u.5   NPL41   NPL4-like protein 1 
 gma-u.5   100811623   NPL4-like protein 1 
 gma-u.5   100779549   NPL4-like protein 1 
 sly-u.5   101248688   NPL4-like protein 2 
 bra-r.6   103862741   NPL4-like protein 1 
 vvi-u.5   100242502   NPL4-like protein 2 
 ppo-u.5   7481454   NPL4-like protein 1 
 ppo-u.5   7466262   NPL4-like protein 1 
 mtr-u.5   25499572   NPL4-like protein 1 
 ghi-r.1   121220107   NPL4-like protein 1 
 ghi-r.1   107930150   NPL4-like protein 1 
 ghi-r.1   107936895   NPL4-like protein 1 
 bna-r.1   106444956   NPL4-like protein 1 
 bna-r.1   111212232   NPL4-like protein 1 
 sot-r.1   102604311   NPL4-like protein 1 
 cit-r.1   102620569   NPL4-like protein 1 
 nta-r.1   107791083   NPL4-like protein 1 
 nta-r.1   107768545   NPL4-like protein 1 

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Top 50 coexpressed genes to 8060985 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060985 (sbi-r.1 coexpression data)

CoexMap"8060985"


sbiLOC8060985 | Entrez gene ID : 8060985      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 3 1 1 2 2 1 1 1 2 1 3 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04141 [list] [network] Protein processing in endoplasmic reticulum (204 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (251 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (42 genes)  IEA  
GO:0043130 [list] [network] ubiquitin binding  (61 genes)  IEA  
Protein XP_002458832.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  mito 3  (predict for XP_002458832.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002458832.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060985
zma-u.5
for
100273080
zma-u.5
for
100194136
osa-u.5
for
4325451
tae-r.2
for
123143925
tae-r.2
for
123136417
tae-r.2
for
123132365
hvu-r.1
for
123402420
bdi-r.1
for
100843046
ath-u.5
for
AT2G47970
ath-u.5
for
NPL41
gma-u.5
for
100811623
gma-u.5
for
100779549
sly-u.5
for
101248688
bra-r.6
for
103862741
vvi-u.5
for
100242502
ppo-u.5
for
7481454
ppo-u.5
for
7466262
mtr-u.5
for
25499572
ghi-r.1
for
121220107
ghi-r.1
for
107930150
ghi-r.1
for
107936895
bna-r.1
for
106444956
bna-r.1
for
111212232
sot-r.1
for
102604311
cit-r.1
for
102620569
nta-r.1
for
107791083
nta-r.1
for
107768545


Ortholog ID: 7975
Species sbi zma zma osa tae tae tae hvu bdi ath ath gma gma sly bra vvi ppo ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC8060985 LOC100273080 LOC100194136 LOC4325451 LOC123143925 LOC123136417 LOC123132365 LOC123402420 LOC100843046 AT2G47970 NPL41 LOC100811623 LOC100779549 LOC101248688 LOC103862741 LOC100242502 LOC7481454 LOC7466262 LOC25499572 LOC121220107 LOC107930150 LOC107947875 LOC106444956 LOC111212232 LOC102604311 LOC102620569 LOC107791083 LOC107768545
Function* NPL4-like protein uncharacterized LOC100273080 NPL4 family NPL4-like protein NPL4-like protein NPL4-like protein NPL4-like protein NPL4-like protein NPL4-like protein Nuclear pore localization protein NPL4 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 2 NPL4-like protein 1 NPL4-like protein 2 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1 NPL4-like protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma04120 Ubiquitin mediated proteolysis 3
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 13
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 13
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
tae04141 Protein processing in endoplasmic reticulum 3
tae02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 6
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma03050 Proteasome 3
gma00020 Citrate cycle (TCA cycle) 2
gma01200 Carbon metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly04120 Ubiquitin mediated proteolysis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 5
vvi01200 Carbon metabolism 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00450 Selenocompound metabolism 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 8
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 7
bna00513 Various types of N-glycan biosynthesis 2
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta00100 Steroid biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta00100 Steroid biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8060985 100273080 100194136 4325451 123143925 123136417 123132365 123402420 100843046 819409 825475 100811623 100779549 101248688 103862741 100242502 7481454 7466262 25499572 121220107 107930150 107947875 106444956 111212232 102604311 102620569 107791083 107768545
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