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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8061908   DNA primase small subunit 
 zma-u.5   103631463   DNA primase small subunit 
 osa-u.5   9267485   uncharacterized LOC9267485 
 tae-r.2   123052974   DNA primase small subunit 
 tae-r.2   123181755   DNA primase small subunit 
 tae-r.2   123129425   DNA primase small subunit 
 hvu-r.1   123440754   DNA primase small subunit-like 
 bdi-r.1   100835644   DNA primase small subunit 
 bdi-r.1   100824089   DNA primase small subunit-like 
 ath-u.5   POLA3   DNA primase POLA3 
 gma-u.5   100780574   DNA primase small subunit 
 sly-u.5   101258292   uncharacterized LOC101258292 
 bra-r.6   103864126   DNA primase small subunit 
 vvi-u.5   100260326   uncharacterized LOC100260326 
 ppo-u.5   7465480   uncharacterized LOC7465480 
 mtr-u.5   11439115   DNA primase small subunit 
 ghi-r.1   107947115   DNA primase small subunit 
 ghi-r.1   107947091   DNA primase small subunit 
 bna-r.1   106446323   DNA primase small subunit-like 
 bna-r.1   106376473   DNA primase small subunit-like 
 sot-r.1   102590488   DNA primase small subunit 
 cit-r.1   102613266   uncharacterized LOC102613266 
 nta-r.1   107784359   uncharacterized LOC107784359 
 nta-r.1   107779384   uncharacterized LOC107779384 
 cre-r.1   CHLRE_07g312350v5   uncharacterized protein 

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Top 50 coexpressed genes to 8061908 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8061908 (sbi-r.1 coexpression data)

CoexMap"8061908"


sbiLOC8061908 | Entrez gene ID : 8061908    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 2 1 1 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03030 [list] [network] DNA replication (53 genes)
GO BP
GO:0006269 [list] [network] DNA replication, synthesis of primer  (2 genes)  IEA  
GO CC
GO:0005658 [list] [network] alpha DNA polymerase:primase complex  (5 genes)  IEA  
GO MF
Protein XP_002440953.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for XP_002440953.2)
Subcellular
localization
TargetP
other 9  (predict for XP_002440953.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8061908
zma-u.5
for
103631463
osa-u.5
for
9267485
tae-r.2
for
123052974
tae-r.2
for
123181755
tae-r.2
for
123129425
hvu-r.1
for
123440754
bdi-r.1
for
100835644
bdi-r.1
for
100824089
ath-u.5
for
POLA3
gma-u.5
for
100780574
sly-u.5
for
101258292
bra-r.6
for
103864126
vvi-u.5
for
100260326
ppo-u.5
for
7465480
mtr-u.5
for
11439115
ghi-r.1
for
107947115
ghi-r.1
for
107947091
bna-r.1
for
106446323
bna-r.1
for
106376473
sot-r.1
for
102590488
cit-r.1
for
102613266
nta-r.1
for
107784359
nta-r.1
for
107779384
cre-r.1
for
CHLRE_07g312350v5


Ortholog ID: 8176
Species sbi zma osa tae tae tae hvu bdi bdi ath gma sly bra vvi ppo mtr ghi ghi bna sot cit nta nta cre
Symbol LOC8061908 LOC103631463 LOC9267485 LOC123052974 LOC123181755 LOC123129425 LOC123440754 LOC100835644 LOC100824089 POLA3 LOC100780574 LOC101258292 LOC103864126 LOC100260326 LOC7465480 LOC11439115 LOC107947115 LOC107947091 LOC106376473 LOC102590488 LOC102613266 LOC107784359 LOC107779384 CHLRE_07g312350v5
Function* DNA primase small subunit DNA primase small subunit uncharacterized LOC9267485 DNA primase small subunit DNA primase small subunit DNA primase small subunit DNA primase small subunit-like DNA primase small subunit DNA primase small subunit-like DNA primase POLA3 DNA primase small subunit uncharacterized LOC101258292 DNA primase small subunit uncharacterized LOC100260326 uncharacterized LOC7465480 DNA primase small subunit DNA primase small subunit DNA primase small subunit DNA primase small subunit-like DNA primase small subunit uncharacterized LOC102613266 uncharacterized LOC107784359 uncharacterized LOC107779384 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 11
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03020 RNA polymerase 3
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 14
tae03430 Mismatch repair 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03030 DNA replication 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 10
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 8
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 10
ath03420 Nucleotide excision repair 5
ath03430 Mismatch repair 5
ath03440 Homologous recombination 4
ath03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 13
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03440 Homologous recombination 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 13
mtr03420 Nucleotide excision repair 4
mtr03430 Mismatch repair 3
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 12
bna03430 Mismatch repair 5
bna03460 Fanconi anemia pathway 3
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 5
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 14
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 7
nta03440 Homologous recombination 4
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8061908 103631463 9267485 123052974 123181755 123129425 123440754 100835644 100824089 834193 100780574 101258292 103864126 100260326 7465480 11439115 107947115 107947091 106376473 102590488 102613266 107784359 107779384 5726324
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