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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8064289  APO protein 3, mitochondrial 
 zma-u.5  107521954  APO protein 3 mitochondrial 
 osa-u.5  4343818  APO protein 3, mitochondrial 
 tae-r.2  123137716  APO protein 3, mitochondrial 
 hvu-r.1  123402038  APO protein 3, mitochondrial 
 bdi-r.1  100844907  APO protein 3, mitochondrial 
 ath-u.5  APO3  APO RNA-binding protein (DUF794) 
 gma-u.5  100812693  APO protein 3, mitochondrial 
 gma-u.5  100811924  APO protein 3, mitochondrial 
 sly-u.5  101261651  APO protein 3, mitochondrial 
 bra-r.6  103837397  APO protein 3, mitochondrial 
 vvi-u.5  100240983  APO protein 3, mitochondrial 
 vvi-u.5  100854712  APO protein 3, mitochondrial 
 ppo-u.5  7457581  APO protein 3, mitochondrial 
 mtr-u.5  11405958  APO protein 3, mitochondrial 
 mtr-u.5  120576004  APO protein 3, mitochondrial 
 ghi-r.1  107946616  APO protein 3, mitochondrial 
 ghi-r.1  107946886  APO protein 3, mitochondrial 
 ghi-r.1  107886987  APO protein 3, mitochondrial 
 bna-r.1  106451936  APO protein 3, mitochondrial-like 
 bna-r.1  106366086  APO protein 3, mitochondrial-like 
 sot-r.1  102585880  APO protein 3, mitochondrial 
 cit-r.1  102626222  APO protein 3, mitochondrial 
 cit-r.1  102617800  APO protein 3, mitochondrial-like 
 nta-r.1  107779914  APO protein 3, mitochondrial-like 
 nta-r.1  107775677  APO protein 3, mitochondrial 

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Top 50 coexpressed genes to 8064289 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8064289 (sbi-r.1 coexpression data)

CoexMap"8064289"


sbiLOC8064289 | Entrez gene ID : 8064289
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 1 1 1 1 2 1 1 2 1 2 3 2 1 2 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002454004.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  chlo_mito 3,  mito 1  (predict for XP_002454004.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002454004.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8064289


zma-u.5
for
107521954


osa-u.5
for
4343818


tae-r.2
for
123137716


hvu-r.1
for
123402038


bdi-r.1
for
100844907


ath-u.5
for
APO3


gma-u.5
for
100812693


gma-u.5
for
100811924


sly-u.5
for
101261651


bra-r.6
for
103837397


vvi-u.5
for
100240983


vvi-u.5
for
100854712


ppo-u.5
for
7457581


mtr-u.5
for
11405958


mtr-u.5
for
120576004


ghi-r.1
for
107946616


ghi-r.1
for
107946886


ghi-r.1
for
107886987


bna-r.1
for
106451936


bna-r.1
for
106366086


sot-r.1
for
102585880


cit-r.1
for
102626222


cit-r.1
for
102617800


nta-r.1
for
107779914


nta-r.1
for
107775677



Ortholog ID: 8210
Species sbi zma osa tae hvu bdi ath gma gma sly bra vvi vvi ppo mtr mtr ghi ghi ghi bna bna sot cit cit nta nta
Symbol LOC8064289 LOC107521954 LOC4343818 LOC123137716 LOC123402038 LOC100844907 APO3 LOC100812693 LOC100811924 LOC101261651 LOC103837397 LOC100240983 LOC100854712 LOC7457581 LOC11405958 LOC120576004 LOC107946616 LOC107946886 LOC107886987 LOC106451936 LOC106366086 LOC102585880 LOC102626222 LOC102617800 LOC107779914 LOC107775677
Function* APO protein 3, mitochondrial APO protein 3 mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO RNA-binding protein (DUF794) APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial-like APO protein 3, mitochondrial-like APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial-like APO protein 3, mitochondrial-like APO protein 3, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8064289 107521954 4343818 123137716 123402038 100844907 836314 100812693 100811924 101261651 103837397 100240983 100854712 7457581 11405958 120576004 107946616 107946886 107886987 106451936 106366086 102585880 102626222 102617800 107779914 107775677
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