ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8064443	transmembrane protein 230
sbi-r.1	8060626	transmembrane protein 230
sbi-r.1	8076133	transmembrane protein 230
sbi-r.1	8058460	transmembrane protein 230
zma-u.5	103638860	transmembrane protein 230
zma-u.5	100272280	uncharacterized LOC100272280
zma-u.5	100194113	uncharacterized LOC100194113
osa-u.5	9272112	uncharacterized LOC9272112
osa-u.5	4349686	uncharacterized LOC4349686
osa-u.5	4328479	uncharacterized LOC4328479
tae-r.2	123120392	transmembrane protein 230
tae-r.2	123168610	transmembrane protein 230
tae-r.2	123111334	transmembrane protein 230
hvu-r.1	123411384	transmembrane protein 230-like
hvu-r.1	123397635	transmembrane protein 230-like
hvu-r.1	123401529	transmembrane protein 230-like
bdi-r.1	100834078	transmembrane protein 230
bdi-r.1	100824361	transmembrane protein 230
ath-u.5	AT2G19350	transmembrane protein (DUF872)
ath-u.5	AT3G29170	transmembrane protein (DUF872)
gma-u.5	100305463	uncharacterized LOC100305463
gma-u.5	100500481	uncharacterized LOC100500481
gma-u.5	100527046	uncharacterized LOC100527046
sly-u.5	101247042	uncharacterized LOC101247042
sly-u.5	101247835	uncharacterized LOC101247835
bra-r.6	103837955	transmembrane protein 230
bra-r.6	103853246	transmembrane protein 230
bra-r.6	103828306	transmembrane protein 230
vvi-u.5	100258189	uncharacterized LOC100258189
ppo-u.5	7473634	uncharacterized LOC7473634
ppo-u.5	7474713	uncharacterized LOC7474713
ppo-u.5	7484040	uncharacterized LOC7484040
mtr-u.5	11443758	transmembrane protein 230
mtr-u.5	11444401	transmembrane protein 230
mtr-u.5	11443334	transmembrane protein 230
ghi-r.1	121220285	transmembrane protein 230
ghi-r.1	107957131	transmembrane protein 230
ghi-r.1	107924361	transmembrane protein 230
bna-r.1	106375533	transmembrane protein 230-like
bna-r.1	106371111	transmembrane protein 230-like
bna-r.1	106371107	transmembrane protein 230-like
sot-r.1	102606185	transmembrane protein 230
sot-r.1	102584498	transmembrane protein 230-like
cit-r.1	102614647	uncharacterized LOC102614647
cit-r.1	102615705	uncharacterized LOC102615705
nta-r.1	107798415	uncharacterized LOC107798415
nta-r.1	107784367	uncharacterized LOC107784367
nta-r.1	107781565	uncharacterized LOC107781565
cre-r.1	CHLRE_16g678150v5	uncharacterized protein
cre-r.1	CHLRE_01g031600v5	uncharacterized protein

Top 50 coexpressed genes to 8064443 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8064443 (sbi-r.1 coexpression data)

CoexMap"8064443"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0012505 [list] [network] endomembrane system

(1143 genes)

IEA

GO MF

Protein

XP_002465104.1 [sequence] [blastp]
XP_021306934.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 3, cyto 3, cyto_nucl 3	(predict for XP_002465104.1)
chlo 3, nucl 3, cyto 3, cyto_nucl 3	(predict for XP_021306934.1)

Subcellular
localization
TargetP

other 8, mito 4	(predict for XP_002465104.1)
other 8, mito 4	(predict for XP_021306934.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8064443	sbi-r.1 for 8060626	sbi-r.1 for 8076133	sbi-r.1 for 8058460	zma-u.5 for 103638860	zma-u.5 for 100272280	zma-u.5 for 100194113	osa-u.5 for 9272112	osa-u.5 for 4349686	osa-u.5 for 4328479	tae-r.2 for 123120392	tae-r.2 for 123168610	tae-r.2 for 123111334	hvu-r.1 for 123411384	hvu-r.1 for 123397635	hvu-r.1 for 123401529	bdi-r.1 for 100834078	bdi-r.1 for 100824361	ath-u.5 for AT2G19350	ath-u.5 for AT3G29170	gma-u.5 for 100305463	gma-u.5 for 100500481	gma-u.5 for 100527046	sly-u.5 for 101247042	sly-u.5 for 101247835	bra-r.6 for 103837955	bra-r.6 for 103853246	bra-r.6 for 103828306	vvi-u.5 for 100258189	ppo-u.5 for 7473634	ppo-u.5 for 7474713	ppo-u.5 for 7484040	mtr-u.5 for 11443758	mtr-u.5 for 11444401	mtr-u.5 for 11443334	ghi-r.1 for 121220285	ghi-r.1 for 107957131	ghi-r.1 for 107924361	bna-r.1 for 106375533	bna-r.1 for 106371111	bna-r.1 for 106371107	sot-r.1 for 102606185	sot-r.1 for 102584498	cit-r.1 for 102614647	cit-r.1 for 102615705	nta-r.1 for 107798415	nta-r.1 for 107784367	nta-r.1 for 107781565	cre-r.1 for CHLRE_16g678150v5	cre-r.1 for CHLRE_01g031600v5

Ortholog

Ortholog ID: 1225

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

transmembrane protein 230

uncharacterized LOC100272280

uncharacterized LOC100194113

uncharacterized LOC9272112

uncharacterized LOC4349686

uncharacterized LOC4328479

transmembrane protein 230

uncharacterized LOC123148565

transmembrane protein 230

transmembrane protein 230-like

transmembrane protein 230

transmembrane protein (DUF872)

uncharacterized LOC100305463

uncharacterized LOC100500481

transmembrane protein 230

uncharacterized LOC101247042

uncharacterized LOC101247835

transmembrane protein 230

uncharacterized LOC100258189

uncharacterized LOC7473634

uncharacterized LOC7474713

uncharacterized LOC7484040

transmembrane protein 230

transmembrane protein 230-like

transmembrane protein 230

transmembrane protein 230-like

uncharacterized LOC102614647

uncharacterized LOC102615705

uncharacterized LOC107798415

uncharacterized LOC107784367

uncharacterized LOC107774103

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03420	Nucleotide excision repair	2
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	7
sbi00670	One carbon pool by folate	4
sbi01240	Biosynthesis of cofactors	4
sbi00941	Flavonoid biosynthesis	3
sbi00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	2
zma00190	Oxidative phosphorylation	2
zma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	3
osa04141	Protein processing in endoplasmic reticulum	3
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	2
osa03015	mRNA surveillance pathway	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	4
osa00600	Sphingolipid metabolism	2
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	6
tae03083	Polycomb repressive complex	3
tae04141	Protein processing in endoplasmic reticulum	3
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00620	Pyruvate metabolism	3
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04145	Phagosome	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00071	Fatty acid degradation	2
hvu00410	beta-Alanine metabolism	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3
bdi03040	Spliceosome	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	4
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00564	Glycerophospholipid metabolism	2
bra04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2
bra03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03083	Polycomb repressive complex	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	4
mtr03040	Spliceosome	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	3
ghi03420	Nucleotide excision repair	3
ghi04820	Cytoskeleton in muscle cells	2
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	6
ghi03083	Polycomb repressive complex	4
ghi04141	Protein processing in endoplasmic reticulum	4
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	3
ghi03420	Nucleotide excision repair	3
ghi04820	Cytoskeleton in muscle cells	2
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04145	Phagosome	4
sot03060	Protein export	3
sot04141	Protein processing in endoplasmic reticulum	2
sot00190	Oxidative phosphorylation	2
sot04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	5
cit04141	Protein processing in endoplasmic reticulum	2
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	4
cit04517	IgSF CAM signaling	3
cit04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	5
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2
nta00240	Pyrimidine metabolism	2
nta00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	5
nta04141	Protein processing in endoplasmic reticulum	4
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	4
cre01230	Biosynthesis of amino acids	4
cre00260	Glycine, serine and threonine metabolism	3
cre00270	Cysteine and methionine metabolism	3
cre00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre04130	SNARE interactions in vesicular transport	2
cre03272	Virion - Hepatitis viruses	2

Expression

Expression pattern

Entrez Gene ID^*

8064443

8076133

8058460

103638860

100272280

100194113

9272112

4349686

4328479

123120392

123148565

123159836

123397635

123401529

123409998

100834078

100824361

100828197

816452

822567

100305463

100500481

100784815

101247042

101247835

103837955

103854150

103875103

100258189

7473634

7474713

7484040

11443758

11444401

11443334

107911816

107899455

107924761

106371111

106371107

106406966

102606185

102584498

102614647

102615705

107798415

107784367

107774103

66056691

5715386

The preparation time of this page was 0.4 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	2	2	3	2	3	1	3	3	3	3	2	2	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8064443 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8064443 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**