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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065846   upstream activation factor subunit spp27 
 sbi-r.1   8085909   upstream activation factor subunit UAF30 
 zma-u.5   100284437   uncharacterized LOC100284437 
 zma-u.5   100275998   uncharacterized LOC100275998 
 osa-u.5   4352303   upstream activation factor subunit spp27 
 osa-u.5   4334190   upstream activation factor subunit UAF30 
 tae-r.2   123102732   protein TRI1 
 tae-r.2   123105109   protein TRI1 
 tae-r.2   123113401   protein TRI1 
 hvu-r.1   123398169   protein TRI1-like 
 hvu-r.1   123452351   upstream activation factor subunit spp27 
 bdi-r.1   100845539   upstream activation factor subunit UAF30 
 bdi-r.1   100825851   zinc finger CCCH domain-containing protein 19 
 ath-u.5   AT2G14880   SWIB/MDM2 domain superfamily protein 
 ath-u.5   AT4G34290   SWIB/MDM2 domain superfamily protein 
 gma-u.5   100499975   uncharacterized LOC100499975 
 gma-u.5   100306198   uncharacterized LOC100306198 
 sly-u.5   101245505   SWIB_MDM2 domain protein 
 bra-r.6   103862335   upstream activation factor subunit spp27 
 bra-r.6   103839109   protein TRI1 
 vvi-u.5   100242279   upstream activation factor subunit spp27 
 ppo-u.5   7465059   zinc finger CCCH domain-containing protein 44 
 ppo-u.5   7469615   uncharacterized LOC7469615 
 mtr-u.5   11437910   upstream activation factor subunit UAF30 
 ghi-r.1   121222146   upstream activation factor subunit UAF30 
 ghi-r.1   107938387   SWI/SNF complex component SNF12 homolog 
 ghi-r.1   107908859   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 
 bna-r.1   106393879   upstream activation factor subunit spp27 
 bna-r.1   106356561   protein TRI1 
 bna-r.1   111214104   upstream activation factor subunit UAF30-like 
 sot-r.1   102582026   zinc finger CCCH domain-containing protein 19-like 
 sot-r.1   102593782   protein TRI1-like 
 sot-r.1   102593466   uncharacterized LOC102593466 
 cit-r.1   112499258   uncharacterized LOC112499258 
 nta-r.1   107768113   uncharacterized LOC107768113 
 nta-r.1   107769537   protein TRI1 
 nta-r.1   107771590   uncharacterized LOC107771590 

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Top 50 coexpressed genes to 8065846 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8065846 (sbi-r.1 coexpression data)

CoexMap"8065846"


sbiLOC8065846 | Entrez gene ID : 8065846      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 2 2 3 2 2 2 2 1 2 1 2 1 3 3 3 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
Protein XP_002443244.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 4  (predict for XP_002443244.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for XP_002443244.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065846
sbi-r.1
for
8085909
zma-u.5
for
100284437
zma-u.5
for
100275998
osa-u.5
for
4352303
osa-u.5
for
4334190
tae-r.2
for
123102732
tae-r.2
for
123105109
tae-r.2
for
123113401
hvu-r.1
for
123398169
hvu-r.1
for
123452351
bdi-r.1
for
100845539
bdi-r.1
for
100825851
ath-u.5
for
AT2G14880
ath-u.5
for
AT4G34290
gma-u.5
for
100499975
gma-u.5
for
100306198
sly-u.5
for
101245505
bra-r.6
for
103862335
bra-r.6
for
103839109
vvi-u.5
for
100242279
ppo-u.5
for
7465059
ppo-u.5
for
7469615
mtr-u.5
for
11437910
ghi-r.1
for
121222146
ghi-r.1
for
107938387
ghi-r.1
for
107908859
bna-r.1
for
106393879
bna-r.1
for
106356561
bna-r.1
for
111214104
sot-r.1
for
102582026
sot-r.1
for
102593782
sot-r.1
for
102593466
cit-r.1
for
112499258
nta-r.1
for
107768113
nta-r.1
for
107769537
nta-r.1
for
107771590


Ortholog ID: 4337
Species sbi sbi zma zma osa osa tae tae tae hvu hvu bdi bdi ath ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot sot sot cit nta nta nta
Symbol LOC8065846 LOC8085909 LOC100284437 LOC100275998 LOC4352303 LOC4334190 LOC123102732 LOC123105109 LOC123119903 LOC123398169 LOC123452351 LOC100845539 LOC100825851 AT2G14880 AT4G34290 LOC100499975 LOC100306198 LOC101245505 LOC103862335 LOC103839109 LOC100242279 LOC7465059 LOC7469615 LOC11437910 LOC121222146 LOC107938387 LOC107917025 LOC106393879 LOC111214104 LOC106402067 LOC102582026 LOC102593782 LOC102593466 LOC112499258 LOC107768113 LOC107769537 LOC107805825
Function* upstream activation factor subunit spp27 upstream activation factor subunit UAF30 uncharacterized LOC100284437 uncharacterized LOC100275998 upstream activation factor subunit spp27 upstream activation factor subunit UAF30 protein TRI1 protein TRI1 protein TRI1 protein TRI1-like upstream activation factor subunit spp27 upstream activation factor subunit UAF30 zinc finger CCCH domain-containing protein 19 SWIB/MDM2 domain superfamily protein SWIB/MDM2 domain superfamily protein uncharacterized LOC100499975 uncharacterized LOC100306198 SWIB_MDM2 domain protein upstream activation factor subunit spp27 protein TRI1 upstream activation factor subunit spp27 zinc finger CCCH domain-containing protein 44 uncharacterized LOC7469615 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog upstream activation factor subunit spp27 upstream activation factor subunit UAF30-like upstream activation factor subunit UAF30 zinc finger CCCH domain-containing protein 19-like protein TRI1-like uncharacterized LOC102593466 uncharacterized LOC112499258 uncharacterized LOC107768113 protein TRI1 uncharacterized LOC107805825
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04626 Plant-pathogen interaction 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03018 RNA degradation 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03018 RNA degradation 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 4
hvu01200 Carbon metabolism 3
hvu00030 Pentose phosphate pathway 2
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00290 Valine, leucine and isoleucine biosynthesis 3
bra00770 Pantothenate and CoA biosynthesis 3
bra01210 2-Oxocarboxylic acid metabolism 3
bra01230 Biosynthesis of amino acids 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot01240 Biosynthesis of cofactors 3
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8065846 8085909 100284437 100275998 4352303 4334190 123102732 123105109 123119903 123398169 123452351 100845539 100825851 815977 829579 100499975 100306198 101245505 103862335 103839109 100242279 7465059 7469615 11437910 121222146 107938387 107917025 106393879 111214104 106402067 102582026 102593782 102593466 112499258 107768113 107769537 107805825
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