ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8068383	probable aminotransferase ACS12
zma-u.5	100279580	1-aminocyclopropane-1-carboxylate synthase3
osa-u.5	4340002	1-aminocyclopropane-1-carboxylate synthase 6-like
tae-r.2	543470	probable aminotransferase ACS12
tae-r.2	123149202	probable aminotransferase ACS12
tae-r.2	123165334	probable aminotransferase ACS12
hvu-r.1	123413564	probable aminotransferase ACS12
bdi-r.1	100828755	probable aminotransferase ACS12
ath-u.5	ACS12	1-amino-cyclopropane-1-carboxylate synthase 12
ath-u.5	ACS10	ACC synthase 10
gma-u.5	100811906	probable aminotransferase ACS12
gma-u.5	100783490	probable aminotransferase ACS12
gma-u.5	100800539	probable aminotransferase ACS12
sly-u.5	101257494	probable aminotransferase ACS10
sly-u.5	101245229	probable aminotransferase ACS12
bra-r.6	103852131	probable aminotransferase ACS12
bra-r.6	103838354	probable aminotransferase ACS10
vvi-u.5	100251582	probable aminotransferase ACS12
vvi-u.5	100244464	probable aminotransferase ACS10
ppo-u.5	7481838	probable aminotransferase ACS12
ppo-u.5	7465817	probable aminotransferase ACS10
mtr-u.5	25497153	probable aminotransferase ACS12
mtr-u.5	11436806	probable aminotransferase ACS10
ghi-r.1	121211231	probable aminotransferase ACS12
ghi-r.1	107953658	probable aminotransferase ACS12
ghi-r.1	107926988	probable aminotransferase ACS10
bna-r.1	106366537	probable aminotransferase ACS10
bna-r.1	106430236	probable aminotransferase ACS10
bna-r.1	106380997	probable aminotransferase ACS12
sot-r.1	102600659	probable aminotransferase ACS10
sot-r.1	102604058	probable aminotransferase ACS12
cit-r.1	102617765	probable aminotransferase ACS10
cit-r.1	102624941	probable aminotransferase ACS12
nta-r.1	107760426	putative aminotransferase ACS12
nta-r.1	107823648	putative aminotransferase ACS12
nta-r.1	107813855	putative aminotransferase ACS12

Top 50 coexpressed genes to 8068383 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8068383 (sbi-r.1 coexpression data)

CoexMap"8068383"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006520 [list] [network] amino acid metabolic process	(328 genes)	IEA
GO:0009058 [list] [network] biosynthetic process	(2805 genes)	IEA

GO CC

GO MF

GO:0008483 [list] [network] transaminase activity	(45 genes)	IEA
GO:0030170 [list] [network] pyridoxal phosphate binding	(85 genes)	IEA

Protein

XP_002436408.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, E.R. 2, nucl 1, chlo_mito 1, E.R._plas 1

(predict for XP_002436408.1)

Subcellular
localization
TargetP

other 8, chlo 4

(predict for XP_002436408.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8068383	zma-u.5 for 100279580	osa-u.5 for 4340002	tae-r.2 for 543470	tae-r.2 for 123149202	tae-r.2 for 123165334	hvu-r.1 for 123413564	bdi-r.1 for 100828755	ath-u.5 for ACS12	ath-u.5 for ACS10	gma-u.5 for 100811906	gma-u.5 for 100783490	gma-u.5 for 100800539	sly-u.5 for 101257494	sly-u.5 for 101245229	bra-r.6 for 103852131	bra-r.6 for 103838354	vvi-u.5 for 100251582	vvi-u.5 for 100244464	ppo-u.5 for 7481838	ppo-u.5 for 7465817	mtr-u.5 for 25497153	mtr-u.5 for 11436806	ghi-r.1 for 121211231	ghi-r.1 for 107953658	ghi-r.1 for 107926988	bna-r.1 for 106366537	bna-r.1 for 106430236	bna-r.1 for 106380997	sot-r.1 for 102600659	sot-r.1 for 102604058	cit-r.1 for 102617765	cit-r.1 for 102624941	nta-r.1 for 107760426	nta-r.1 for 107823648	nta-r.1 for 107813855

Ortholog

Ortholog ID: 4299

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

ACS12

ACS10

Function^*