ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8071264	probable 2-oxoglutarate-dependent dioxygenase At3g111800
sbi-r.1	8057750	probable 2-oxoglutarate-dependent dioxygenase At3g111800
sbi-r.1	8084036	probable 2-oxoglutarate-dependent dioxygenase At5g05600
zma-u.5	100502161	jasmonate-regulated gene 21
zma-u.5	100273620	jasmonate-regulated gene 21
zma-u.5	103636527	probable 2-oxoglutarate-dependent dioxygenase At5g05600
osa-u.5	4332499	jasmonate-induced oxygenase 2
osa-u.5	4337689	jasmonate-induced oxygenase 2
tae-r.2	123189521	jasmonate-induced oxygenase 1
tae-r.2	123120534	jasmonate-induced oxygenase 4
tae-r.2	123062492	jasmonate-induced oxygenase 2
hvu-r.1	123448920	jasmonate-induced oxygenase 4-like
hvu-r.1	123440558	jasmonate-induced oxygenase 2-like
hvu-r.1	123412434	jasmonate-induced oxygenase 4-like
bdi-r.1	100825242	probable 2-oxoglutarate-dependent dioxygenase ANS
bdi-r.1	100842307	probable 2-oxoglutarate-dependent dioxygenase At5g05600
ath-u.5	AT2G38240	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
ath-u.5	JRG21	jasmonate-regulated gene 21
gma-u.5	100801693	flavonol synthase/flavanone 3-hydroxylase-like
gma-u.5	100783384	probable 2-oxoglutarate-dependent dioxygenase At5g05600
gma-u.5	100794125	probable 2-oxoglutarate-dependent dioxygenase At5g05600
sly-u.5	101260801	jasmonate-induced oxygenase 2
sly-u.5	101248628	jasmonate-induced oxygenase 2
bra-r.6	103857763	probable 2-oxoglutarate-dependent dioxygenase ANS
bra-r.6	103863127	probable 2-oxoglutarate-dependent dioxygenase JRG21
bra-r.6	103865658	probable 2-oxoglutarate-dependent dioxygenase ANS
vvi-u.5	100264239	jasmonate-induced oxygenase 1
vvi-u.5	100245030	jasmonate-induced oxygenase 2
ppo-u.5	7487324	jasmonate-induced oxygenase 2
ppo-u.5	7474430	jasmonate-induced oxygenase 2
ppo-u.5	7468057	jasmonate-induced oxygenase 2
mtr-u.5	11417986	probable 2-oxoglutarate-dependent dioxygenase At5g05600
mtr-u.5	11420410	probable 2-oxoglutarate-dependent dioxygenase At5g05600
mtr-u.5	25498759	probable 2-oxoglutarate-dependent dioxygenase At5g05600
ghi-r.1	107890958	probable 2-oxoglutarate-dependent dioxygenase ANS
ghi-r.1	107937049	probable 2-oxoglutarate-dependent dioxygenase ANS
ghi-r.1	107955173	probable 2-oxoglutarate-dependent dioxygenase At5g05600
bna-r.1	111202304	jasmonate-induced oxygenase 3
bna-r.1	106422614	jasmonate-induced oxygenase 2
bna-r.1	106433271	jasmonate-induced oxygenase 1-like
sot-r.1	102582404	leucoanthocyanidin dioxygenase-like
sot-r.1	102579898	protein SRG1-like
sot-r.1	102582752	leucoanthocyanidin dioxygenase-like
cit-r.1	102610597	jasmonate-induced oxygenase 2
cit-r.1	102627583	jasmonate-induced oxygenase 2
nta-r.1	107788009	jasmonate-induced oxygenase 3
nta-r.1	107787195	jasmonate-induced oxygenase 2
nta-r.1	107804912	jasmonate-induced oxygenase 3-like

Top 50 coexpressed genes to 8071264 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8071264 (sbi-r.1 coexpression data)

CoexMap"8071264"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002440516.1 [sequence] [blastp]
XP_021304040.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, chlo 1, pero 1, cysk 1	(predict for XP_002440516.1)
chlo 9, cyto 1	(predict for XP_021304040.1)

Subcellular
localization
TargetP

other 8	(predict for XP_002440516.1)
other 8	(predict for XP_021304040.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8071264	sbi-r.1 for 8057750	sbi-r.1 for 8084036	zma-u.5 for 100502161	zma-u.5 for 100273620	zma-u.5 for 103636527	osa-u.5 for 4332499	osa-u.5 for 4337689	tae-r.2 for 123189521	tae-r.2 for 123120534	tae-r.2 for 123062492	hvu-r.1 for 123448920	hvu-r.1 for 123440558	hvu-r.1 for 123412434	bdi-r.1 for 100825242	bdi-r.1 for 100842307	ath-u.5 for AT2G38240	ath-u.5 for JRG21	gma-u.5 for 100801693	gma-u.5 for 100783384	gma-u.5 for 100794125	sly-u.5 for 101260801	sly-u.5 for 101248628	bra-r.6 for 103857763	bra-r.6 for 103863127	bra-r.6 for 103865658	vvi-u.5 for 100264239	vvi-u.5 for 100245030	ppo-u.5 for 7487324	ppo-u.5 for 7474430	ppo-u.5 for 7468057	mtr-u.5 for 11417986	mtr-u.5 for 11420410	mtr-u.5 for 25498759	ghi-r.1 for 107890958	ghi-r.1 for 107937049	ghi-r.1 for 107955173	bna-r.1 for 111202304	bna-r.1 for 106422614	bna-r.1 for 106433271	sot-r.1 for 102582404	sot-r.1 for 102579898	sot-r.1 for 102582752	cit-r.1 for 102610597	cit-r.1 for 102627583	nta-r.1 for 107788009	nta-r.1 for 107787195	nta-r.1 for 107804912

Ortholog

Ortholog ID: 866

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

JRG21

Function^*

probable 2-oxoglutarate-dependent dioxygenase At3g111800

probable 2-oxoglutarate-dependent dioxygenase At5g05600

jasmonate-regulated gene 21

probable 2-oxoglutarate-dependent dioxygenase At5g05600

probable 2-oxoglutarate-dependent dioxygenase ANS

jasmonate-induced oxygenase 2

jasmonate-induced oxygenase 1

jasmonate-induced oxygenase 2

jasmonate-induced oxygenase 4-like

jasmonate-induced oxygenase 2-like

jasmonate-induced oxygenase 4-like

probable 2-oxoglutarate-dependent dioxygenase ANS

probable 2-oxoglutarate-dependent dioxygenase At5g05600

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

jasmonate-regulated gene 21

probable 2-oxoglutarate-dependent dioxygenase At5g05600

jasmonate-induced oxygenase 2

jasmonate-induced oxygenase 1-like

probable 2-oxoglutarate-dependent dioxygenase JRG21

probable 2-oxoglutarate-dependent dioxygenase ANS

probable 2-oxoglutarate-dependent dioxygenase At5g05600

jasmonate-induced oxygenase 1

jasmonate-induced oxygenase 2

probable 2-oxoglutarate-dependent dioxygenase At5g05600

probable 2-oxoglutarate-dependent dioxygenase ANS

probable 2-oxoglutarate-dependent dioxygenase At3g111800

jasmonate-induced oxygenase 3

jasmonate-induced oxygenase 4

leucoanthocyanidin dioxygenase-like

protein SRG1-like

leucoanthocyanidin dioxygenase-like

jasmonate-induced oxygenase 2

jasmonate-induced oxygenase 2-like

jasmonate-induced oxygenase 4

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00591	Linoleic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	9
zma04016	MAPK signaling pathway - plant	8
zma00906	Carotenoid biosynthesis	2
zma00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	8
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	6
tae00904	Diterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	7
tae00480	Glutathione metabolism	4
tae00270	Cysteine and methionine metabolism	3
tae00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	6
bdi00330	Arginine and proline metabolism	2
bdi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	6
sly00592	alpha-Linolenic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00250	Alanine, aspartate and glutamate metabolism	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	2
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00592	alpha-Linolenic acid metabolism	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00592	alpha-Linolenic acid metabolism	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00592	alpha-Linolenic acid metabolism	4
ppo00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00260	Glycine, serine and threonine metabolism	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00592	alpha-Linolenic acid metabolism	5
ppo04075	Plant hormone signal transduction	3
ppo00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	5
mtr00230	Purine metabolism	3
mtr00240	Pyrimidine metabolism	3
mtr01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	2
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	6
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

8071264

8057750

8084036

100502161

103636527

103629177

4332499

4337689

4327401

123189521

123071299

123085570

123448920

123440558

123412434

100825242

100842307

818403

824763

100783384

100794125

100820497

101260801

101248628

101246681

103863127

103865658

103855634

100264239

100245030

7487324

7468057

7460357

11417986

25498759

11418940

107890958

107937049

107958057

111202304

106364954

106438159

102582404

102579898

102582752

102610597

102627583

107820810

107787193

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	2	3	3	2	2	3	2	3	2	3	3	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8071264 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8071264 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**