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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8072425   pre-mRNA-splicing factor ISY1 homolog 
 zma-u.5   100282530   uncharacterized LOC100282530 
 osa-u.5   4329902   uncharacterized LOC4329902 
 tae-r.2   123127631   pre-mRNA-splicing factor ISY1 homolog 
 tae-r.2   123137394   pre-mRNA-splicing factor ISY1 homolog 
 tae-r.2   123144742   pre-mRNA-splicing factor ISY1 homolog 
 hvu-r.1   123402031   pre-mRNA-splicing factor ISY1 homolog 
 bdi-r.1   100837197   pre-mRNA-splicing factor ISY1 homolog 
 ath-u.5   AT3G18790   pre-mRNA-splicing factor ISY1-like protein 
 gma-u.5   100783606   pre-mRNA-splicing factor ISY1 homolog 
 sly-u.5   101262521   uncharacterized LOC101262521 
 vvi-u.5   100250525   pre-mRNA-splicing factor ISY1 homolog-like 
 ppo-u.5   18107108   uncharacterized LOC18107108 
 mtr-u.5   11437391   pre-mRNA-splicing factor ISY1 homolog 
 ghi-r.1   107886001   pre-mRNA-splicing factor ISY1 homolog 
 ghi-r.1   107924917   pre-mRNA-splicing factor ISY1 homolog 
 ghi-r.1   107950582   pre-mRNA-splicing factor ISY1 homolog 
 bna-r.1   106451929   pre-mRNA-splicing factor ISY1 homolog 
 bna-r.1   106446838   pre-mRNA-splicing factor ISY1 homolog 
 bna-r.1   125608968   pre-mRNA-splicing factor ISY1 homolog 
 sot-r.1   102585139   pre-mRNA-splicing factor ISY1 homolog 
 cit-r.1   102627416   uncharacterized LOC102627416 
 nta-r.1   107813591   uncharacterized LOC107813591 
 nta-r.1   107812596   uncharacterized LOC107812596 
 cre-r.1   CHLRE_10g427150v5   uncharacterized protein 

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Top 50 coexpressed genes to 8072425 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8072425 (sbi-r.1 coexpression data)

CoexMap"8072425"


sbiLOC8072425 | Entrez gene ID : 8072425      
Species sbi zma osa tae hvu bdi ath gma sly vvi ppo mtr ghi bna sot cit nta cre bra
Paralog 1 1 1 3 1 1 1 1 1 1 1 1 3 3 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO:0000389 [list] [network] mRNA 3'-splice site recognition  (1 genes)  IEA  
GO:0000350 [list] [network] generation of catalytic spliceosome for second transesterification step  (3 genes)  IEA  
GO CC
GO:0071020 [list] [network] post-spliceosomal complex  (3 genes)  IEA  
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (12 genes)  IEA  
GO:0000974 [list] [network] Prp19 complex  (13 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (61 genes)  IEA  
GO MF
Protein XP_002454133.1 [sequence] [blastp]
XP_021316112.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for XP_002454133.1)
nucl 8,  cyto 2  (predict for XP_021316112.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002454133.1)
other 7  (predict for XP_021316112.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8072425
zma-u.5
for
100282530
osa-u.5
for
4329902
tae-r.2
for
123127631
tae-r.2
for
123137394
tae-r.2
for
123144742
hvu-r.1
for
123402031
bdi-r.1
for
100837197
ath-u.5
for
AT3G18790
gma-u.5
for
100783606
sly-u.5
for
101262521
vvi-u.5
for
100250525
ppo-u.5
for
18107108
mtr-u.5
for
11437391
ghi-r.1
for
107886001
ghi-r.1
for
107924917
ghi-r.1
for
107950582
bna-r.1
for
106451929
bna-r.1
for
106446838
bna-r.1
for
125608968
sot-r.1
for
102585139
cit-r.1
for
102627416
nta-r.1
for
107813591
nta-r.1
for
107812596
cre-r.1
for
CHLRE_10g427150v5


Ortholog ID: 6565
Species sbi zma osa tae tae tae hvu bdi ath gma sly vvi ppo mtr ghi ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC8072425 LOC100282530 LOC4329902 LOC123127631 LOC123137394 LOC123144742 LOC123402031 LOC100837197 AT3G18790 LOC100778539 LOC101262521 LOC100250525 LOC18107108 LOC11437391 LOC107886001 LOC107924917 LOC107950582 LOC106451929 LOC106446838 LOC125608968 LOC102585139 LOC102627416 LOC107813591 LOC107812596 CHLRE_10g427150v5
Function* pre-mRNA-splicing factor ISY1 homolog uncharacterized LOC100282530 uncharacterized LOC4329902 pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1-like protein pre-mRNA-splicing factor ISY1 homolog uncharacterized LOC101262521 pre-mRNA-splicing factor ISY1 homolog-like uncharacterized LOC18107108 pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog uncharacterized LOC102627416 uncharacterized LOC107813591 uncharacterized LOC107812596 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03015 mRNA surveillance pathway 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 9
ghi01040 Biosynthesis of unsaturated fatty acids 8
ghi01212 Fatty acid metabolism 8
ghi03040 Spliceosome 5
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 9
ghi00062 Fatty acid elongation 8
ghi01040 Biosynthesis of unsaturated fatty acids 7
ghi01212 Fatty acid metabolism 7
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 9
ghi00062 Fatty acid elongation 8
ghi01040 Biosynthesis of unsaturated fatty acids 7
ghi01212 Fatty acid metabolism 7
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
cre03015 mRNA surveillance pathway 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8072425 100282530 4329902 123127631 123137394 123144742 123402031 100837197 821412 100778539 101262521 100250525 18107108 11437391 107886001 107924917 107950582 106451929 106446838 125608968 102585139 102627416 107813591 107812596 5728168
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