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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8072480   H/ACA ribonucleoprotein complex subunit 3-like protein 
 sbi-r.1   8066838   H/ACA ribonucleoprotein complex subunit 3-like protein 
 zma-u.5   118472080   H/ACA ribonucleoprotein complex subunit 3-like protein 
 zma-u.5   100284497   h/ACA ribonucleoprotein complex subunit 3-like protein 
 osa-u.5   9269830   H/ACA ribonucleoprotein complex subunit 3-like protein 
 tae-r.2   123144844   H/ACA ribonucleoprotein complex subunit 3-like protein 
 tae-r.2   123137490   H/ACA ribonucleoprotein complex subunit 3-like protein 
 tae-r.2   123127759   H/ACA ribonucleoprotein complex subunit 3-like protein 
 hvu-r.1   123402897   H/ACA ribonucleoprotein complex subunit 3-like protein 
 bdi-r.1   100831459   H/ACA ribonucleoprotein complex subunit 3-like protein 
 ath-u.5   NOP10   nucleolar RNA-binding Nop10p family protein 
 gma-u.5   100500467   H/ACA ribonucleoprotein complex subunit 3-like protein 
 gma-u.5   100306376   H/ACA ribonucleoprotein complex subunit 3-like protein 
 sly-u.5   101254236   H/ACA ribonucleoprotein complex subunit 3-like protein 
 bra-r.6   103838016   H/ACA ribonucleoprotein complex subunit 3-like protein 
 bra-r.6   103842599   H/ACA ribonucleoprotein complex subunit 3-like protein 
 bra-r.6   103828170   H/ACA ribonucleoprotein complex subunit 3-like protein 
 ppo-u.5   18099671   H/ACA ribonucleoprotein complex subunit 3-like protein 
 ppo-u.5   7471960   H/ACA ribonucleoprotein complex subunit 3-like protein 
 mtr-u.5   25501480   H/ACA ribonucleoprotein complex subunit 3-like protein 
 mtr-u.5   25499275   H/ACA ribonucleoprotein complex subunit 3-like protein 
 ghi-r.1   107901875   H/ACA ribonucleoprotein complex subunit 3-like protein 
 ghi-r.1   107961782   H/ACA ribonucleoprotein complex subunit 3-like protein 
 ghi-r.1   107937498   H/ACA ribonucleoprotein complex subunit 3-like protein 
 bna-r.1   106365257   H/ACA ribonucleoprotein complex subunit 3-like protein 
 bna-r.1   106436693   H/ACA ribonucleoprotein complex subunit 3-like protein 
 bna-r.1   106380698   H/ACA ribonucleoprotein complex subunit 3-like protein 
 sot-r.1   102595894   H/ACA ribonucleoprotein complex subunit 3-like protein 
 sot-r.1   102579299   H/ACA ribonucleoprotein complex subunit 3-like protein 
 cit-r.1   102608916   H/ACA ribonucleoprotein complex subunit 3-like protein 
 nta-r.1   107789005   H/ACA ribonucleoprotein complex subunit 3-like protein 
 cre-r.1   CHLRE_05g237700v5   uncharacterized protein 

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Top 50 coexpressed genes to 8072480 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8072480 (sbi-r.1 coexpression data)

CoexMap"8072480"


sbiLOC8072480 | Entrez gene ID : 8072480      
Species sbi zma osa tae hvu bdi ath gma sly bra ppo mtr ghi bna sot cit nta cre vvi
Paralog 2 2 1 3 1 1 1 2 1 3 2 2 3 3 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03008 [list] [network] Ribosome biogenesis in eukaryotes (91 genes)
GO BP
GO:1904874 [list] [network] positive regulation of telomerase RNA localization to Cajal body  (2 genes)  IEA  
GO:0031120 [list] [network] snRNA pseudouridine synthesis  (7 genes)  IEA  
GO:0031118 [list] [network] rRNA pseudouridine synthesis  (8 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (293 genes)  IEA  
GO CC
GO:0090661 [list] [network] box H/ACA telomerase RNP complex  (2 genes)  IEA  
GO:0031429 [list] [network] box H/ACA snoRNP complex  (8 genes)  IEA  
GO MF
GO:0070034 [list] [network] telomerase RNA binding  (4 genes)  IEA  
GO:0034513 [list] [network] box H/ACA snoRNA binding  (5 genes)  IEA  
Protein XP_002454180.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 3,  nucl 2,  cyto_mito 2,  mito_plas 2  (predict for XP_002454180.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002454180.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8072480
sbi-r.1
for
8066838
zma-u.5
for
118472080
zma-u.5
for
100284497
osa-u.5
for
9269830
tae-r.2
for
123144844
tae-r.2
for
123137490
tae-r.2
for
123127759
hvu-r.1
for
123402897
bdi-r.1
for
100831459
ath-u.5
for
NOP10
gma-u.5
for
100500467
gma-u.5
for
100306376
sly-u.5
for
101254236
bra-r.6
for
103838016
bra-r.6
for
103842599
bra-r.6
for
103828170
ppo-u.5
for
18099671
ppo-u.5
for
7471960
mtr-u.5
for
25501480
mtr-u.5
for
25499275
ghi-r.1
for
107901875
ghi-r.1
for
107961782
ghi-r.1
for
107937498
bna-r.1
for
106365257
bna-r.1
for
106436693
bna-r.1
for
106380698
sot-r.1
for
102595894
sot-r.1
for
102579299
cit-r.1
for
102608916
nta-r.1
for
107789005
cre-r.1
for
CHLRE_05g237700v5


Ortholog ID: 5683
Species sbi sbi zma zma osa tae tae tae hvu bdi ath gma gma sly bra bra bra ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit nta cre
Symbol LOC8072480 LOC8066838 LOC118472080 LOC100284497 LOC9269830 LOC123144844 LOC123137490 LOC123127759 LOC123402897 LOC100831459 NOP10 LOC100500467 LOC100306376 LOC101254236 LOC103838016 LOC103842599 LOC103828170 LOC18099671 LOC7471960 LOC25501480 LOC25499275 LOC107901875 LOC107961782 LOC107914525 LOC106357560 LOC106365224 LOC106365253 LOC102595894 LOC102579299 LOC102608916 LOC107789005 CHLRE_05g237700v5
Function* H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein h/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein nucleolar RNA-binding Nop10p family protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein H/ACA ribonucleoprotein complex subunit 3-like protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
zma03040 Spliceosome 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma03008 Ribosome biogenesis in eukaryotes 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae04120 Ubiquitin mediated proteolysis 5
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae04120 Ubiquitin mediated proteolysis 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03008 Ribosome biogenesis in eukaryotes 3
tae04120 Ubiquitin mediated proteolysis 3
tae03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03010 Ribosome 4
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma04120 Ubiquitin mediated proteolysis 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03082 ATP-dependent chromatin remodeling 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03008 Ribosome biogenesis in eukaryotes 5
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 7
bna03008 Ribosome biogenesis in eukaryotes 6
bna03020 RNA polymerase 4
bna03040 Spliceosome 3
bna03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03040 Spliceosome 4
sot03008 Ribosome biogenesis in eukaryotes 3
sot04120 Ubiquitin mediated proteolysis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 7
cre03020 RNA polymerase 4
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8072480 8066838 118472080 100284497 9269830 123144844 123137490 123127759 123402897 100831459 816569 100500467 100306376 101254236 103838016 103842599 103828170 18099671 7471960 25501480 25499275 107901875 107961782 107914525 106357560 106365224 106365253 102595894 102579299 102608916 107789005 5723350
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