ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8073541	hexuronate transporter
sbi-r.1	8056181	uncharacterized LOC8056181
sbi-r.1	8056180	uncharacterized LOC8056180
sbi-r.1	8056179	uncharacterized LOC8056179
zma-u.5	100285582	carbohydrate transporter/ sugar porter/ transporter
zma-u.5	100282913	carbohydrate transporter/ sugar porter/ transporter
zma-u.5	100193741	Major facilitator superfamily protein
osa-u.5	9270036	uncharacterized LOC9270036
osa-u.5	4345544	uncharacterized LOC4345544
osa-u.5	4346891	uncharacterized LOC4346891
tae-r.2	123066588	hexuronate transporter
tae-r.2	123103610	uncharacterized LOC123103610
hvu-r.1	123396544	uncharacterized LOC123396544
hvu-r.1	123395650	uncharacterized LOC123395650
hvu-r.1	123398118	hexuronate transporter-like
bdi-r.1	100836982	hexuronate transporter
ath-u.5	AT5G10190	Major facilitator superfamily protein
gma-u.5	100783378	uncharacterized LOC100783378
gma-u.5	100787672	uncharacterized LOC100787672
sly-u.5	101255697	uncharacterized LOC101255697
sly-u.5	101252077	uncharacterized LOC101252077
bra-r.6	103850332	uncharacterized LOC103850332
vvi-u.5	100255818	uncharacterized LOC100255818
vvi-u.5	100241664	uncharacterized LOC100241664
ppo-u.5	7490218	uncharacterized LOC7490218
mtr-u.5	25501920	high affinity nitrate transporter 2.5
mtr-u.5	25501921	uncharacterized LOC25501921
mtr-u.5	25501923	protein spinster
ghi-r.1	107899737	uncharacterized LOC107899737
ghi-r.1	107905125	uncharacterized LOC107905125
ghi-r.1	107911643	uncharacterized LOC107911643
bna-r.1	125593984	uncharacterized LOC125593984
bna-r.1	125603873	tetracycline resistance protein, class B-like
bna-r.1	106418480	tetracycline resistance protein, class B
nta-r.1	107771453	uncharacterized LOC107771453
nta-r.1	107790952	uncharacterized LOC107790952

Top 50 coexpressed genes to 8073541 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8073541 (sbi-r.1 coexpression data)

CoexMap"8073541"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(920 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3172 genes)

IEA

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(1159 genes)

IEA

Protein

XP_002444321.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 6, plas 3, extr 1, E.R. 1

(predict for XP_002444321.1)

Subcellular
localization
TargetP

other 6, mito 4

(predict for XP_002444321.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8073541	sbi-r.1 for 8056181	sbi-r.1 for 8056180	sbi-r.1 for 8056179	zma-u.5 for 100285582	zma-u.5 for 100282913	zma-u.5 for 100193741	osa-u.5 for 9270036	osa-u.5 for 4345544	osa-u.5 for 4346891	tae-r.2 for 123066588	tae-r.2 for 123103610	hvu-r.1 for 123396544	hvu-r.1 for 123395650	hvu-r.1 for 123398118	bdi-r.1 for 100836982	ath-u.5 for AT5G10190	gma-u.5 for 100783378	gma-u.5 for 100787672	sly-u.5 for 101255697	sly-u.5 for 101252077	bra-r.6 for 103850332	vvi-u.5 for 100255818	vvi-u.5 for 100241664	ppo-u.5 for 7490218	mtr-u.5 for 25501920	mtr-u.5 for 25501921	mtr-u.5 for 25501923	ghi-r.1 for 107899737	ghi-r.1 for 107905125	ghi-r.1 for 107911643	bna-r.1 for 125593984	bna-r.1 for 125603873	bna-r.1 for 106418480	nta-r.1 for 107771453	nta-r.1 for 107790952

Ortholog

Ortholog ID: 1133

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

nta

Symbol

Function^*

hexuronate transporter

uncharacterized LOC8056179

hexuronate transporter

carbohydrate transporter/ sugar porter/ transporter

uncharacterized LOC9270036

uncharacterized LOC4346891

uncharacterized LOC4346892

MFS-type efflux pump MSMEG_3705

uncharacterized LOC123396544

uncharacterized LOC123395650

fosmidomycin resistance protein-like

hexuronate transporter

uncharacterized LOC100840971

Major facilitator superfamily protein

uncharacterized LOC100783378

uncharacterized LOC100787672

uncharacterized LOC101255697

uncharacterized LOC101247024

uncharacterized LOC103850332

uncharacterized LOC100255818

uncharacterized LOC100241664

uncharacterized LOC7490218

high affinity nitrate transporter 2.5

uncharacterized LOC25501921

protein spinster homolog 3

uncharacterized LOC107899737

uncharacterized LOC107905125

uncharacterized LOC107899726

tetracycline resistance protein, class B-like

tetracycline resistance protein, class B

tetracycline resistance protein, class B-like

uncharacterized LOC102586698

tetracycline resistance protein, class B-like

uncharacterized LOC107797770

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	9
sbi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	8
sbi00350	Tyrosine metabolism	3
sbi00280	Valine, leucine and isoleucine degradation	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi00510	N-Glycan biosynthesis	2
sbi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00061	Fatty acid biosynthesis	2
zma00071	Fatty acid degradation	2
zma01212	Fatty acid metabolism	2
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00592	alpha-Linolenic acid metabolism	3
zma00402	Benzoxazinoid biosynthesis	2
zma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2
hvu04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	3
bdi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04145	Phagosome	4
bdi04517	IgSF CAM signaling	4
bdi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	2
vvi04626	Plant-pathogen interaction	2
vvi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo04075	Plant hormone signal transduction	2
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	3
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	7
mtr04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00360	Phenylalanine metabolism	2
ghi00940	Phenylpropanoid biosynthesis	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi01200	Carbon metabolism	2
ghi00740	Riboflavin metabolism	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00480	Glutathione metabolism	7
bna04626	Plant-pathogen interaction	4
bna04016	MAPK signaling pathway - plant	3
bna04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00480	Glutathione metabolism	5
bna04626	Plant-pathogen interaction	4
bna04016	MAPK signaling pathway - plant	3
bna04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot04016	MAPK signaling pathway - plant	2
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	2
nta00566	Sulfoquinovose metabolism	2
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8073541

8056179

8056178

100285582

100282913

9270036

4346891

4346892

123143939

123396544

123395650

123418328

100836982

100840971

830883

100783378

100787672

101255697

101247024

103850332

100255818

100241664

7490218

25501920

25501921

11433553

107899737

107905125

107899726

125603873

106418480

106383127

102586698

102586372

107797770

The preparation time of this page was 0.2 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	nta	sot	cre	cit
Paralog	4	3	3	2	3	1	1	2	2	1	2	1	3	3	3	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8073541 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8073541 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**