ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8074003	uncharacterized LOC8074003
sbi-r.1	110436242	uncharacterized LOC110436242
sbi-r.1	8073923	uncharacterized LOC8073923
zma-u.5	100383970	uncharacterized LOC100383970
zma-u.5	100191285	uncharacterized LOC100191285
zma-u.5	103648495	uncharacterized LOC103648495
osa-u.5	4337491	uncharacterized LOC4337491
osa-u.5	4330258	uncharacterized LOC4330258
osa-u.5	4335868	uncharacterized LOC4335868
tae-r.2	123055362	uncharacterized LOC123055362
tae-r.2	123127954	uncharacterized LOC123127954
tae-r.2	123045475	uncharacterized LOC123045475
hvu-r.1	123430285	uncharacterized LOC123430285
hvu-r.1	123428524	uncharacterized LOC123428524
hvu-r.1	123404221	uncharacterized LOC123404221
bdi-r.1	100828851	uncharacterized LOC100828851
bdi-r.1	100833843	uncharacterized LOC100833843
bdi-r.1	100835413	uncharacterized LOC100835413
ath-u.5	AT2G41990	late embryogenesis abundant protein
ath-u.5	AT5G42860	late embryogenesis abundant protein, group 2
gma-u.5	100817846	uncharacterized LOC100817846
gma-u.5	100817451	uncharacterized LOC100817451
gma-u.5	100811519	uncharacterized LOC100811519
sly-u.5	101250111	uncharacterized LOC101250111
sly-u.5	101266178	uncharacterized LOC101266178
sly-u.5	101261986	uncharacterized LOC101261986
bra-r.6	103858409	uncharacterized LOC103858409
bra-r.6	103848363	uncharacterized LOC103848363
vvi-u.5	100254049	uncharacterized LOC100254049
ppo-u.5	18104872	uncharacterized LOC18104872
ppo-u.5	7474973	uncharacterized LOC7474973
mtr-u.5	11414391	uncharacterized LOC11414391
mtr-u.5	25492862	uncharacterized LOC25492862
ghi-r.1	107913241	uncharacterized LOC107913241
ghi-r.1	107927846	uncharacterized LOC107927846
ghi-r.1	107910748	uncharacterized LOC107910748
bna-r.1	111206475	uncharacterized LOC111206475
bna-r.1	125579458	uncharacterized LOC125579458
sot-r.1	102592145	uncharacterized LOC102592145
sot-r.1	102589271	uncharacterized LOC102589271
sot-r.1	102598022	uncharacterized LOC102598022
cit-r.1	102631034	hypothetical protein
cit-r.1	102607477	uncharacterized LOC102607477
nta-r.1	107823438	uncharacterized LOC107823438
nta-r.1	107804162	uncharacterized LOC107804162
nta-r.1	107807542	uncharacterized LOC107807542

Top 50 coexpressed genes to 8074003 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8074003 (sbi-r.1 coexpression data)

CoexMap"8074003"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002446492.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, E.R. 3, mito 1, cyto_E.R. 1

(predict for XP_002446492.1)

Subcellular
localization
TargetP

chlo 6

(predict for XP_002446492.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8074003	sbi-r.1 for 110436242	sbi-r.1 for 8073923	zma-u.5 for 100383970	zma-u.5 for 100191285	zma-u.5 for 103648495	osa-u.5 for 4337491	osa-u.5 for 4330258	osa-u.5 for 4335868	tae-r.2 for 123055362	tae-r.2 for 123127954	tae-r.2 for 123045475	hvu-r.1 for 123430285	hvu-r.1 for 123428524	hvu-r.1 for 123404221	bdi-r.1 for 100828851	bdi-r.1 for 100833843	bdi-r.1 for 100835413	ath-u.5 for AT2G41990	ath-u.5 for AT5G42860	gma-u.5 for 100817846	gma-u.5 for 100817451	gma-u.5 for 100811519	sly-u.5 for 101250111	sly-u.5 for 101266178	sly-u.5 for 101261986	bra-r.6 for 103858409	bra-r.6 for 103848363	vvi-u.5 for 100254049	ppo-u.5 for 18104872	ppo-u.5 for 7474973	mtr-u.5 for 11414391	mtr-u.5 for 25492862	ghi-r.1 for 107913241	ghi-r.1 for 107927846	ghi-r.1 for 107910748	bna-r.1 for 111206475	bna-r.1 for 125579458	sot-r.1 for 102592145	sot-r.1 for 102589271	sot-r.1 for 102598022	cit-r.1 for 102631034	cit-r.1 for 102607477	nta-r.1 for 107823438	nta-r.1 for 107804162	nta-r.1 for 107807542

Ortholog

Ortholog ID: 932

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8074003

uncharacterized LOC110436242

uncharacterized LOC8073923

uncharacterized LOC100191285

uncharacterized LOC100384786

uncharacterized LOC100276241

uncharacterized LOC4337491

uncharacterized LOC4330258

uncharacterized LOC4335868

uncharacterized LOC123055362

uncharacterized LOC123145051

uncharacterized LOC123053321

uncharacterized LOC123430285

uncharacterized LOC123428524

uncharacterized LOC123404221

uncharacterized LOC100828851

uncharacterized LOC100833843

uncharacterized LOC100835413

late embryogenesis abundant protein

uncharacterized protein

uncharacterized LOC100817451

uncharacterized LOC100783160

uncharacterized LOC100787767

uncharacterized LOC101250111

uncharacterized LOC101266178

uncharacterized LOC101261986

uncharacterized LOC103839276

uncharacterized LOC100254049

uncharacterized LOC18104872

uncharacterized LOC7474973

uncharacterized LOC7470430

uncharacterized LOC11414391

uncharacterized LOC25492862

uncharacterized LOC11418273

uncharacterized LOC107913241

uncharacterized LOC107927846

uncharacterized LOC107908633

uncharacterized LOC106371871

uncharacterized LOC106388508

uncharacterized LOC106388509

uncharacterized LOC102592145

uncharacterized LOC102589271

uncharacterized LOC102598022

hypothetical protein

uncharacterized LOC102607477

uncharacterized LOC107804162

uncharacterized LOC107807542

uncharacterized LOC142181640

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	3
sbi00052	Galactose metabolism	3
sbi00591	Linoleic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	3
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	4
ath04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	2
sly00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01250	Biosynthesis of nucleotide sugars	3
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00670	One carbon pool by folate	3
ppo00270	Cysteine and methionine metabolism	2
ppo01230	Biosynthesis of amino acids	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00710	Carbon fixation by Calvin cycle	2
mtr01200	Carbon metabolism	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	3
sot00710	Carbon fixation by Calvin cycle	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01240	Biosynthesis of cofactors	2
nta01250	Biosynthesis of nucleotide sugars	2

Expression

Expression pattern

Entrez Gene ID^*

8074003

110436242

8073923

100191285

100384786

100276241

4337491

4330258

4335868

123055362

123145051

123053321

123430285

123428524

123404221

100828851

100833843

100835413

818799

841102

100817451

100783160

100787767

101250111

101266178

101261986

103839276

100254049

18104872

7474973

7470430

11414391

25492862

11418273

107913241

107927846

107908633

106371871

106388508

106388509

102592145

102589271

102598022

102631034

102607477

107804162

107807542

142181640

The preparation time of this page was 0.3 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	3	3	3	3	2	3	3	2	1	2	2	3	2	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8074003 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8074003 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**