ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8076208	hydrophobic protein OSR8
sbi-r.1	8084551	low temperature-induced protein lt101.2
zma-u.5	109944085	hydrophobic protein LTI6A-like
zma-u.5	100281117	uncharacterized LOC100281117
zma-u.5	100285273	hydrophobic protein LTI6B
osa-u.5	4325147	hydrophobic protein LTI6B
osa-u.5	4332481	low temperature-induced protein lt101.2
tae-r.2	123190524	hydrophobic protein LTI6B
tae-r.2	123160508	hydrophobic protein RCI2A
tae-r.2	123187824	hydrophobic protein LTI6A
hvu-r.1	123425134	hydrophobic protein LTI6A
hvu-r.1	123405939	low temperature-induced protein lt101.2-like
hvu-r.1	123407491	hydrophobic protein OSR8-like
bdi-r.1	100838843	hydrophobic protein OSR8
bdi-r.1	106865867	hydrophobic protein LTI6A
ath-u.5	AT4G30660	Low temperature and salt responsive protein family
gma-u.5	100792684	hydrophobic protein RCI2B
gma-u.5	100815133	salt stress-induced hydrophobic peptide ESI3
gma-u.5	100775235	hydrophobic protein RCI2B
sly-u.5	101247136	UPF0057 membrane protein At4g30660
sly-u.5	101246835	UPF0057 membrane protein At4g30660
bra-r.6	103864512	UPF0057 membrane protein At2g24040
bra-r.6	103832337	UPF0057 membrane protein At2g24040-like
bra-r.6	103847631	UPF0057 membrane protein At1g57550-like
ppo-u.5	7457887	salt stress-induced hydrophobic peptide ESI3
ppo-u.5	18098449	hydrophobic protein LTI6B
ppo-u.5	112327652	hydrophobic protein LTI6B-like
mtr-u.5	11433105	hydrophobic protein RCI2B
mtr-u.5	11435303	hydrophobic protein LTI6B
mtr-u.5	11437571	UPF0057 membrane protein At4g30660
ghi-r.1	107893498	hydrophobic protein RCI2B
ghi-r.1	107899432	salt stress-induced hydrophobic peptide ESI3
sot-r.1	102605564	hydrophobic protein LTI6A-like
cit-r.1	102622068	hydrophobic protein RCI2B
cit-r.1	102621787	hydrophobic protein RCI2B
cit-r.1	102612753	UPF0057 membrane protein At4g30660
cre-r.1	CHLRE_03g197513v5	uncharacterized protein

Top 50 coexpressed genes to 8076208 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8076208 (sbi-r.1 coexpression data)

CoexMap"8076208"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3172 genes)

IEA

GO MF

Protein

XP_002437973.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, plas 2, E.R. 2, E.R._plas 2

(predict for XP_002437973.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_002437973.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8076208	sbi-r.1 for 8084551	zma-u.5 for 109944085	zma-u.5 for 100281117	zma-u.5 for 100285273	osa-u.5 for 4325147	osa-u.5 for 4332481	tae-r.2 for 123190524	tae-r.2 for 123160508	tae-r.2 for 123187824	hvu-r.1 for 123425134	hvu-r.1 for 123405939	hvu-r.1 for 123407491	bdi-r.1 for 100838843	bdi-r.1 for 106865867	ath-u.5 for AT4G30660	gma-u.5 for 100792684	gma-u.5 for 100815133	gma-u.5 for 100775235	sly-u.5 for 101247136	sly-u.5 for 101246835	bra-r.6 for 103864512	bra-r.6 for 103832337	bra-r.6 for 103847631	ppo-u.5 for 7457887	ppo-u.5 for 18098449	ppo-u.5 for 112327652	mtr-u.5 for 11433105	mtr-u.5 for 11435303	mtr-u.5 for 11437571	ghi-r.1 for 107893498	ghi-r.1 for 107899432	sot-r.1 for 102605564	cit-r.1 for 102622068	cit-r.1 for 102621787	cit-r.1 for 102612753	cre-r.1 for CHLRE_03g197513v5

Ortholog

Ortholog ID: 299

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

ppo

mtr

ghi

bna

sot

cit

cre

Symbol

Function^*

low temperature-induced protein lt101.2

hydrophobic protein LTI6A

hydrophobic protein LTI6A-like

uncharacterized LOC100281117

Hydrophobic protein RCI2B

hydrophobic protein LTI6B

hydrophobic protein OSR8-like

hydrophobic protein LTI6A-like

formin-like protein 7

hydrophobic protein RCI2A

low temperature-induced protein lt101.2

salt stress-induced hydrophobic peptide ESI3

low temperature-induced protein lt101.2

hydrophobic protein OSR8-like

hydrophobic protein OSR8

hydrophobic protein LTI6B

Low temperature and salt responsive protein family

salt stress-induced hydrophobic peptide ESI3

hydrophobic protein RCI2B

low temperature induced protein 6B-like protein

UPF0057 membrane protein At4g30660

protein RARE-COLD-INDUCIBLE 2B-like

protein RARE-COLD-INDUCIBLE 2A-like

UPF0057 membrane protein At2g24040-like

hydrophobic protein RCI2B

salt stress-induced hydrophobic peptide ESI3

hydrophobic protein LTI6B

UPF0057 membrane protein At4g30660

hydrophobic protein RCI2B

salt stress-induced hydrophobic peptide ESI3

UPF0057 membrane protein At4g30660

hydrophobic protein RCI2B-like

UPF0057 membrane protein At4g30650

UPF0057 membrane protein At4g30660

hydrophobic protein RCI2B

UPF0057 membrane protein At4g30660

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	5
zma04145	Phagosome	4
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	5
zma04016	MAPK signaling pathway - plant	3
zma04070	Phosphatidylinositol signaling system	3
zma04075	Plant hormone signal transduction	3
zma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00062	Fatty acid elongation	2
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	5
osa03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	3
tae00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	4
bdi03060	Protein export	3
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00040	Pentose and glucuronate interconversions	2
gma00053	Ascorbate and aldarate metabolism	2
gma00561	Glycerolipid metabolism	2
gma00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra00520	Amino sugar and nucleotide sugar metabolism	3
bra01250	Biosynthesis of nucleotide sugars	3
bra01230	Biosynthesis of amino acids	2
bra00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2
ppo04145	Phagosome	2
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00100	Steroid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03060	Protein export	2
sot04141	Protein processing in endoplasmic reticulum	2
sot04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04814	Motor proteins	5

Expression

Expression pattern

Entrez Gene ID^*

8084551

110432819

109944085

100281117

100303875

4325147

4340332

112938314

123042824

123168557

123116854

123446606

123446608

123451962

100825700

100838178

829189

829188

816938

100815133

100775235

100306281

101246835

101267065

101266765

103832337

103850005

7457887

18098449

7485253

11437571

25494284

11435302

107899432

107888421

106429212

106393646

102583169

102622068

102621787

102612753

66052967

The preparation time of this page was 0.2 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	ppo	mtr	ghi	sot	cit	cre	nta	vvi	bna
Paralog	2	3	2	3	3	2	1	3	2	3	3	3	2	1	3	1	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8076208 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8076208 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**