ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8076232	aquaporin TIP2-1
sbi-r.1	8078102	aquaporin TIP4-4
zma-u.5	103635714	aquaporin TIP4-2-like
zma-u.5	103646110	aquaporin TIP2-3-like
zma-u.5	103646186	probable aquaporin TIP3-2
osa-u.5	4324277	probable aquaporin TIP4-2
osa-u.5	4324276	probable aquaporin TIP4-3
osa-u.5	4324303	probable aquaporin TIP1-2
tae-r.2	123065225	aquaporin TIP4-4
tae-r.2	123058173	probable aquaporin TIP4-2
tae-r.2	123065226	probable aquaporin TIP4-2
hvu-r.1	123402410	probable aquaporin TIP2-1
hvu-r.1	123407685	probable aquaporin TIP2-2
hvu-r.1	123449894	probable aquaporin TIP4-1
bdi-r.1	100843246	probable aquaporin TIP1-2
bdi-r.1	100838472	probable aquaporin TIP4-1
bdi-r.1	100838461	probable aquaporin TIP4-2
ath-u.5	GAMMA-TIP	gamma tonoplast intrinsic protein
ath-u.5	DELTA-TIP	delta tonoplast integral protein
gma-u.5	100788583	aquaporin TIP1-1
gma-u.5	100814469	aquaporin TIP3-3
gma-u.5	100817450	aquaporin TIP3-1
sly-u.5	101261595	probable aquaporin TIP5-1
sly-u.5	101250514	probable aquaporin TIP3-2
sly-u.5	778315	aquaporin-like
bra-r.6	103875293	aquaporin TIP1-2
bra-r.6	103865561	aquaporin TIP1-1
bra-r.6	103827648	aquaporin TIP2-3
vvi-u.5	100252631	aquaporin TIP4-1
vvi-u.5	100263698	aquaporin TIP1-1
ppo-u.5	7463322	aquaporin TIP1-1
ppo-u.5	7478410	aquaporin TIP2-1
ghi-r.1	107931794	probable aquaporin TIP1-2
ghi-r.1	107932296	probable aquaporin TIP-type
ghi-r.1	107934072	probable aquaporin TIP-type RB7-5A
bna-r.1	125608317	aquaporin TIP1-1
bna-r.1	125585648	aquaporin TIP1-1
bna-r.1	125587804	aquaporin TIP2-3-like
sot-r.1	102602512	probable aquaporin TIP3-2
sot-r.1	102596615	aquaporin TIP2-1-like
cit-r.1	102611770	aquaporin TIP4-1
cit-r.1	102621052	aquaporin TIP1-3
nta-r.1	107802501	aquaporin TIP2-1-like
nta-r.1	107801866	aquaporin TIP2-1-like
cre-r.1	CHLRE_12g549300v5	uncharacterized protein

Top 50 coexpressed genes to 8076232 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8076232 (sbi-r.1 coexpression data)

CoexMap"8076232"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006833 [list] [network] water transport	(12 genes)	IEA
GO:0055085 [list] [network] transmembrane transport	(920 genes)	IEA

GO CC

GO:0009705 [list] [network] plant-type vacuole membrane

(34 genes)

IEA

GO MF

GO:0015250 [list] [network] water channel activity

(28 genes)

IEA

Protein

XP_002452808.2 [sequence] [blastp]

Subcellular
localization
wolf

vacu 7, plas 2

(predict for XP_002452808.2)

Subcellular
localization
TargetP

scret 6, other 5

(predict for XP_002452808.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8076232	sbi-r.1 for 8078102	zma-u.5 for 103635714	zma-u.5 for 103646110	zma-u.5 for 103646186	osa-u.5 for 4324277	osa-u.5 for 4324276	osa-u.5 for 4324303	tae-r.2 for 123065225	tae-r.2 for 123058173	tae-r.2 for 123065226	hvu-r.1 for 123402410	hvu-r.1 for 123407685	hvu-r.1 for 123449894	bdi-r.1 for 100843246	bdi-r.1 for 100838472	bdi-r.1 for 100838461	ath-u.5 for GAMMA-TIP	ath-u.5 for DELTA-TIP	gma-u.5 for 100788583	gma-u.5 for 100814469	gma-u.5 for 100817450	sly-u.5 for 101261595	sly-u.5 for 101250514	sly-u.5 for 778315	bra-r.6 for 103875293	bra-r.6 for 103865561	bra-r.6 for 103827648	vvi-u.5 for 100252631	vvi-u.5 for 100263698	ppo-u.5 for 7463322	ppo-u.5 for 7478410	ghi-r.1 for 107931794	ghi-r.1 for 107932296	ghi-r.1 for 107934072	bna-r.1 for 125608317	bna-r.1 for 125585648	bna-r.1 for 125587804	sot-r.1 for 102602512	sot-r.1 for 102596615	cit-r.1 for 102611770	cit-r.1 for 102621052	nta-r.1 for 107802501	nta-r.1 for 107801866	cre-r.1 for CHLRE_12g549300v5

Ortholog

Ortholog ID: 83

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

mtr

ghi

bna

sot

cit

nta

cre

Symbol

TIP2;2

TIP2-2

TIP1;1

TIP1;2

Function^*

aquaporin TIP4-4

aquaporin TIP4-2

aquaporin TIP4-2-like

aquaporin TIP2-3-like

probable aquaporin TIP3-2

probable aquaporin TIP3-1

probable aquaporin TIP1-1

aquaporin TIP2-3

probable aquaporin TIP2-2

probable aquaporin TIP4-1

probable aquaporin TIP3-1

probable aquaporin TIP4-1

probable aquaporin TIP4-2

probable aquaporin TIP4-3

gamma tonoplast intrinsic protein

tonoplast intrinsic protein 2;2

aquaporin TIP2-5

probable aquaporin TIP5-1

aquaporin-like

tonoplast intrinsic protein 2.2

probable aquaporin TIP2-2

probable aquaporin TIP3-2

aquaporin TIP1-1

aquaporin-like

aquaporin TIP2-1

aquaporin TIP4-1

probable aquaporin TIP-type RB7-5A

probable aquaporin TIP-type

aquaporin TIP1-1

probable aquaporin TIP1-2

aquaporin TIP3-1

aquaporin TIP1-3

probable aquaporin TIP3-2

aquaporin TIP2-1-like

aquaporin TIP1-1

aquaporin TIP4-1

aquaporin TIP2-1

probable aquaporin TIP2-2

aquaporin TIP2-1-like

putative aquaporin TIP-type RB7-18C

putative aquaporin TIP1-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	3
tae00561	Glycerolipid metabolism	3
tae00600	Sphingolipid metabolism	3
tae00603	Glycosphingolipid biosynthesis - globo and isoglobo series	3
tae00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00073	Cutin, suberine and wax biosynthesis	2
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	5
bdi00630	Glyoxylate and dicarboxylate metabolism	4
bdi04146	Peroxisome	3
bdi00250	Alanine, aspartate and glutamate metabolism	2
bdi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2
mtr00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	4
sot00940	Phenylpropanoid biosynthesis	4
sot00910	Nitrogen metabolism	2
sot00620	Pyruvate metabolism	2
sot00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00592	alpha-Linolenic acid metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

8078102

8066640

103635714

103646110

4336464

4348981

4331608

123041819

100037645

123449894

123409954

100838472

100838461

100844557

818255

827446

100805635

101261595

778315

101055566

103868228

103872561

100263698

100233003

100233004

11435009

11432805

11428968

107929356

121216027

121212692

106399493

106426631

102602512

102596615

102589703

102611770

102624065

102627157

107801866

107802889

107830277

5719640

The preparation time of this page was 2.3 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	ghi	bna	sot	cit	nta	cre	mtr
Paralog	2	3	3	3	3	3	2	3	3	3	2	2	3	3	2	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8076232 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8076232 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**