ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8078240	putative BPI/LBP family protein At1g04970
sbi-r.1	8064213	putative BPI/LBP family protein At1g04970
zma-u.5	100283980	lipid binding protein
zma-u.5	100281751	uncharacterized LOC100281751
osa-u.5	9266292	putative BPI/LBP family protein At1g04970
osa-u.5	4340853	putative BPI/LBP family protein At1g04970
tae-r.2	123104137	putative BPI/LBP family protein At1g04970
tae-r.2	123112363	putative BPI/LBP family protein At1g04970
hvu-r.1	123399307	putative BPI/LBP family protein At1g04970
hvu-r.1	123410387	putative BPI/LBP family protein At1g04970
bdi-r.1	100841510	putative BPI/LBP family protein At1g04970
bdi-r.1	100826584	putative BPI/LBP family protein At1g04970
ath-u.5	AT1G04970	lipid-binding serum glycoprotein family protein
gma-u.5	100815362	putative BPI/LBP family protein At1g04970
gma-u.5	100808142	LBP/BPI-related protein
sly-u.5	101263335	putative BPI/LBP family protein At1g04970
bra-r.6	103844192	putative BPI/LBP family protein At1g04970
vvi-u.5	100264027	putative BPI/LBP family protein At1g04970
vvi-u.5	100265388	putative BPI/LBP family protein At1g04970
ppo-u.5	7455969	putative BPI/LBP family protein At1g04970
ppo-u.5	7487517	putative BPI/LBP family protein At1g04970
mtr-u.5	11430477	putative BPI/LBP family protein At1g04970
mtr-u.5	25489047	putative BPI/LBP family protein At1g04970
mtr-u.5	11429997	putative BPI/LBP family protein At1g04970
ghi-r.1	107912620	putative BPI/LBP family protein At1g04970
ghi-r.1	107924390	putative BPI/LBP family protein At1g04970
bna-r.1	106401733	putative BPI/LBP family protein At1g04970
bna-r.1	106370966	putative BPI/LBP family protein At1g04970
sot-r.1	102598044	putative BPI/LBP family protein At1g04970
cit-r.1	102608610	putative BPI/LBP family protein At1g04970
cit-r.1	102628883	putative BPI/LBP family protein At1g04970
nta-r.1	107819863	putative BPI/LBP family protein At1g04970
nta-r.1	107814007	putative BPI/LBP family protein At1g04970

Top 50 coexpressed genes to 8078240 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8078240 (sbi-r.1 coexpression data)

CoexMap"8078240"

[Cytoscape]

Annotation

functional annotation

KEGG

sbi04620 [list] [network] Toll-like receptor signaling pathway (8 genes)

GO BP

GO CC

GO:0005615 [list] [network] extracellular space

(80 genes)

IEA

GO MF

GO:0008289 [list] [network] lipid binding

(254 genes)

IEA

Protein

XP_002438311.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, vacu 2, E.R. 1

(predict for XP_002438311.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_002438311.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8078240	sbi-r.1 for 8064213	zma-u.5 for 100283980	zma-u.5 for 100281751	osa-u.5 for 9266292	osa-u.5 for 4340853	tae-r.2 for 123104137	tae-r.2 for 123112363	hvu-r.1 for 123399307	hvu-r.1 for 123410387	bdi-r.1 for 100841510	bdi-r.1 for 100826584	ath-u.5 for AT1G04970	gma-u.5 for 100815362	gma-u.5 for 100808142	sly-u.5 for 101263335	bra-r.6 for 103844192	vvi-u.5 for 100264027	vvi-u.5 for 100265388	ppo-u.5 for 7455969	ppo-u.5 for 7487517	mtr-u.5 for 11430477	mtr-u.5 for 25489047	mtr-u.5 for 11429997	ghi-r.1 for 107912620	ghi-r.1 for 107924390	bna-r.1 for 106401733	bna-r.1 for 106370966	sot-r.1 for 102598044	cit-r.1 for 102608610	cit-r.1 for 102628883	nta-r.1 for 107819863	nta-r.1 for 107814007

Ortholog

Ortholog ID: 4825

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

putative BPI/LBP family protein At1g04970

lipid binding protein

uncharacterized LOC100281751

putative BPI/LBP family protein At1g04970

lipid-binding serum glycoprotein family protein

putative BPI/LBP family protein At1g04970

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00600	Sphingolipid metabolism	2
sbi04142	Lysosome	2
sbi04144	Endocytosis	2
sbi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	3
osa00600	Sphingolipid metabolism	3
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	4
tae04620	Toll-like receptor signaling pathway	3
tae00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	3
tae04620	Toll-like receptor signaling pathway	3
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04620	Toll-like receptor signaling pathway	3
tae04136	Autophagy - other	3
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00280	Valine, leucine and isoleucine degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	7
bdi00640	Propanoate metabolism	3
bdi00785	Lipoic acid metabolism	2
bdi01210	2-Oxocarboxylic acid metabolism	2
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04146	Peroxisome	2
ath00071	Fatty acid degradation	2
ath00592	alpha-Linolenic acid metabolism	2
ath01212	Fatty acid metabolism	2
ath00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra03022	Basal transcription factors	2
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
ghi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
ghi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2
bna04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2
bna04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00410	beta-Alanine metabolism	3
nta01200	Carbon metabolism	3
nta04146	Peroxisome	3
nta00280	Valine, leucine and isoleucine degradation	2
nta00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	7
nta04146	Peroxisome	7
nta00380	Tryptophan metabolism	5
nta00630	Glyoxylate and dicarboxylate metabolism	5
nta04016	MAPK signaling pathway - plant	5

Expression

Expression pattern

Entrez Gene ID^*

8078240

8064213

100283980

100281751

9266292

4340853

123104137

123159178

123168367

123399307

123410387

100841510

100826584

839357

100815362

100804747

101263335

103844192

100264027

100265388

7455969

7487517

11430477

25489047

11429997

107912620

107924390

106401733

106370966

102598044

102608610

102628883

107819863

107814007

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	2	2	2	2	2	1	2	1	1	2	2	3	2	2	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8078240 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8078240 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**