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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8078789   gibberellin 3-beta-dioxygenase 2-2 
 zma-u.5   Dwarf1   Gibberellin 3-oxidase 
 osa-u.5   4323864   gibberellin 3-beta-dioxygenase 2-like 
 tae-r.2   123042616   gibberellin 3-beta-dioxygenase 2-1-like 
 tae-r.2   123042617   gibberellin 3-beta-dioxygenase 2-2-like 
 hvu-r.1   123439542   gibberellin 3-beta-dioxygenase 2-2 
 bdi-r.1   100835718   gibberellin 3-beta-dioxygenase 2-2 
 ath-u.5   GA3OX1   gibberellin 3-oxidase 1 
 gma-u.5   GA3OX6   gibberellin 3-beta-dioxygenase 6 
 gma-u.5   GA3OX5   gibberellin 3-beta-dioxygenase 5 
 sly-u.5   101257892   gibberellin 3-beta-dioxygenase 1-like 
 ppo-u.5   7475736   gibberellin 3-beta-dioxygenase 1 
 mtr-u.5   11432515   gibberellin 3-beta-dioxygenase 1 
 mtr-u.5   11432838   gibberellin 3-beta-dioxygenase 1 
 ghi-r.1   107956573   gibberellin 3-beta-dioxygenase 1 
 ghi-r.1   107914840   gibberellin 3-beta-dioxygenase 1 
 ghi-r.1   107939172   gibberellin 3-beta-dioxygenase 1 
 bna-r.1   106436779   gibberellin 3-beta-dioxygenase 4-like 
 sot-r.1   102596258   gibberellin 3-beta-dioxygenase 1-like 
 sot-r.1   102582924   gibberellin 3-beta-dioxygenase 1 
 nta-r.1   107821651   gibberellin 3-beta-dioxygenase 1 

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Top 50 coexpressed genes to 8078789 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8078789 (sbi-r.1 coexpression data)

CoexMap"8078789"


sbiLOC8078789 | Entrez gene ID : 8078789      
Species sbi zma osa tae hvu bdi ath gma sly ppo mtr ghi bna sot nta cre vvi cit bra
Paralog 1 1 1 2 1 1 1 2 1 1 2 3 1 2 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00904 [list] [network] Diterpenoid biosynthesis (30 genes)
GO BP
GO:0009686 [list] [network] gibberellin biosynthetic process  (9 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (101 genes)  IEA  
GO CC
GO MF
GO:0016707 [list] [network] gibberellin 3-beta-dioxygenase activity  (2 genes)  IEA  
Protein XP_002455082.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  pero 3,  chlo_mito 3  (predict for XP_002455082.1)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for XP_002455082.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8078789
zma-u.5
for
Dwarf1
osa-u.5
for
4323864
tae-r.2
for
123042616
tae-r.2
for
123042617
hvu-r.1
for
123439542
bdi-r.1
for
100835718
ath-u.5
for
GA3OX1
gma-u.5
for
GA3OX6
gma-u.5
for
GA3OX5
sly-u.5
for
101257892
ppo-u.5
for
7475736
mtr-u.5
for
11432515
mtr-u.5
for
11432838
ghi-r.1
for
107956573
ghi-r.1
for
107914840
ghi-r.1
for
107939172
bna-r.1
for
106436779
sot-r.1
for
102596258
sot-r.1
for
102582924
nta-r.1
for
107821651


Ortholog ID: 1181
Species sbi zma osa tae tae hvu bdi ath gma sly sly bra ppo mtr mtr ghi ghi bna sot sot nta nta
Symbol LOC8078789 Dwarf1 LOC4323864 LOC123042616 LOC123186485 LOC123439542 LOC100835718 GA3OX2 GA3OX3 3OH-2 GA3ox1 LOC103872350 LOC7475736 LOC11432515 LOC11432838 LOC107914840 LOC107937357 LOC106398553 LOC102597914 LOC107059310 LOC107821651 LOC107824735
Function* gibberellin 3-beta-dioxygenase 2-2 Gibberellin 3-oxidase gibberellin 3-beta-dioxygenase 2-like gibberellin 3-beta-dioxygenase 2-1-like gibberellin 3-beta-dioxygenase 2-3-like gibberellin 3-beta-dioxygenase 2-2 gibberellin 3-beta-dioxygenase 2-2 gibberellin 3-oxidase 2 gibberellin 3-beta-dioxygenase 3 3b-hydroxylase gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 4 gibberellin 3-beta-dioxygenase 1-like gibberellin 3-beta-dioxygenase 1-like gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
tae00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00591 Linoleic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 4
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00904 Diterpenoid biosynthesis 2
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00902 Monoterpenoid biosynthesis 2
mtr00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8078789 101202726 4323864 123042616 123186485 123439542 100835718 844374 100776755 543504 543503 103872350 7475736 11432515 11432838 107914840 107937357 106398553 102597914 107059310 107821651 107824735
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