ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8079297	uncharacterized LOC8079297
sbi-r.1	8058834	uncharacterized LOC8058834
sbi-r.1	8078359	uncharacterized LOC8078359
sbi-r.1	8054403	uncharacterized LOC8054403
zma-u.5	103635405	loricrin-like
zma-u.5	100383395	uncharacterized LOC100383395
zma-u.5	100275699	uncharacterized LOC100275699
osa-u.5	4341173	uncharacterized LOC4341173
osa-u.5	4328931	uncharacterized LOC4328931
tae-r.2	123070164	uncharacterized LOC123070164
tae-r.2	123155686	uncharacterized LOC123155686
tae-r.2	123078598	uncharacterized LOC123078598
hvu-r.1	123407169	uncharacterized LOC123407169
hvu-r.1	123443909	uncharacterized LOC123443909
bdi-r.1	100845094	uncharacterized LOC100845094
bdi-r.1	100836935	uncharacterized LOC100836935
ath-u.5	AT1G64140	WRKY transcription factor
gma-u.5	100776565	uncharacterized LOC100776565
gma-u.5	100784837	uncharacterized LOC100784837
gma-u.5	100809074	uncharacterized LOC100809074
sly-u.5	101256504	uncharacterized LOC101256504
sly-u.5	101268782	uncharacterized LOC101268782
bra-r.6	103838138	uncharacterized LOC103838138
bra-r.6	103838232	uncharacterized LOC103838232
vvi-u.5	100241527	uncharacterized LOC100241527
vvi-u.5	100248452	GDT1-like protein 1, chloroplastic
ppo-u.5	7472731	uncharacterized LOC7472731
ppo-u.5	7497814	uncharacterized LOC7497814
mtr-u.5	25502133	uncharacterized LOC25502133
ghi-r.1	107890695	loricrin
ghi-r.1	107951968	uncharacterized LOC107951968
ghi-r.1	107896465	uncharacterized LOC107896465
bna-r.1	106452599	uncharacterized LOC106452599
bna-r.1	106382017	uncharacterized LOC106382017
bna-r.1	106382014	uncharacterized LOC106382014
sot-r.1	102589461	uncharacterized LOC102589461
sot-r.1	102605155	uncharacterized LOC102605155
cit-r.1	102631154	uncharacterized LOC102631154
nta-r.1	107831715	uncharacterized LOC107831715
nta-r.1	107821888	uncharacterized LOC107821888
nta-r.1	107790513	uncharacterized LOC107790513

Top 50 coexpressed genes to 8079297 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8079297 (sbi-r.1 coexpression data)

CoexMap"8079297"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002441593.1 [sequence] [blastp]
XP_021303423.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, mito 1, pero 1, cysk 1, cyto_pero 1	(predict for XP_002441593.1)
nucl 7, chlo 1, mito 1, chlo_mito 1	(predict for XP_021303423.1)

Subcellular
localization
TargetP

other 8	(predict for XP_002441593.1)
chlo 5, other 3	(predict for XP_021303423.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8079297	sbi-r.1 for 8058834	sbi-r.1 for 8078359	sbi-r.1 for 8054403	zma-u.5 for 103635405	zma-u.5 for 100383395	zma-u.5 for 100275699	osa-u.5 for 4341173	osa-u.5 for 4328931	tae-r.2 for 123070164	tae-r.2 for 123155686	tae-r.2 for 123078598	hvu-r.1 for 123407169	hvu-r.1 for 123443909	bdi-r.1 for 100845094	bdi-r.1 for 100836935	ath-u.5 for AT1G64140	gma-u.5 for 100776565	gma-u.5 for 100784837	gma-u.5 for 100809074	sly-u.5 for 101256504	sly-u.5 for 101268782	bra-r.6 for 103838138	bra-r.6 for 103838232	vvi-u.5 for 100241527	vvi-u.5 for 100248452	ppo-u.5 for 7472731	ppo-u.5 for 7497814	mtr-u.5 for 25502133	ghi-r.1 for 107890695	ghi-r.1 for 107951968	ghi-r.1 for 107896465	bna-r.1 for 106452599	bna-r.1 for 106382017	bna-r.1 for 106382014	sot-r.1 for 102589461	sot-r.1 for 102605155	cit-r.1 for 102631154	nta-r.1 for 107831715	nta-r.1 for 107821888	nta-r.1 for 107790513

Ortholog

Ortholog ID: 4012

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8079297

uncharacterized LOC8078359

uncharacterized LOC8054403

loricrin-like

uncharacterized LOC100383395

uncharacterized LOC100217230

uncharacterized LOC4341173

uncharacterized LOC4328931

uncharacterized LOC123078598

uncharacterized LOC123061521

uncharacterized LOC123148207

uncharacterized LOC123407169

uncharacterized LOC123443909

uncharacterized LOC100845094

uncharacterized LOC100836935

WRKY transcription factor

uncharacterized LOC100776565

uncharacterized LOC100784837

uncharacterized LOC100809074

uncharacterized LOC101256504

uncharacterized LOC101268782

uncharacterized LOC103838138

uncharacterized LOC103838232

uncharacterized LOC100241527

GDT1-like protein 1, chloroplastic

uncharacterized LOC7472731

uncharacterized LOC7497814

uncharacterized LOC25502133

loricrin

uncharacterized LOC107951968

uncharacterized LOC107896465

uncharacterized LOC106452599

uncharacterized LOC106382017

uncharacterized LOC106382014

uncharacterized LOC102589461

uncharacterized LOC102605155

uncharacterized LOC102631154

uncharacterized LOC107831715

uncharacterized LOC107821888

uncharacterized LOC107761730

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00920	Sulfur metabolism	3
sbi01320	Sulfur cycle	3
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	4
zma00920	Sulfur metabolism	3
zma01320	Sulfur cycle	3
zma00480	Glutathione metabolism	2
zma00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3
tae00330	Arginine and proline metabolism	3
tae00910	Nitrogen metabolism	3
tae01310	Nitrogen cycle	3
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3
tae00330	Arginine and proline metabolism	3
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00010	Glycolysis / Gluconeogenesis	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	11
hvu00020	Citrate cycle (TCA cycle)	7
hvu00010	Glycolysis / Gluconeogenesis	6
hvu01210	2-Oxocarboxylic acid metabolism	5
hvu01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00380	Tryptophan metabolism	3
bdi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3
bdi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo00220	Arginine biosynthesis	2
ppo00230	Purine metabolism	2
ppo01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	5
bna00330	Arginine and proline metabolism	5
bna00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	5
bna00330	Arginine and proline metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	5
bna00330	Arginine and proline metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00920	Sulfur metabolism	4
sot01320	Sulfur cycle	4
sot01230	Biosynthesis of amino acids	3
sot00270	Cysteine and methionine metabolism	3
sot00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit04141	Protein processing in endoplasmic reticulum	3
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04016	MAPK signaling pathway - plant	2
nta04626	Plant-pathogen interaction	2
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

8079297

8078359

8054403

103635405

100383395

100217230

4341173

4328931

123078598

123061521

123148207

123407169

123443909

100845094

100836935

842718

100776565

100784837

100809074

101256504

101268782

103838138

103838232

100241527

100248452

7472731

7497814

25502133

107890695

107951968

107896465

106452599

106382017

106382014

102589461

102605155

102631154

107831715

107821888

107761730

The preparation time of this page was 0.2 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	2	3	2	2	1	3	2	2	2	2	1	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8079297 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8079297 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**