ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8079822	uncharacterized LOC8079822
zma-u.5	100280040	GYF domain-containing protein
zma-u.5	103636339	GYF domain-containing protein
osa-u.5	4327226	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
tae-r.2	123080342	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
tae-r.2	123072056	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
tae-r.2	123063152	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
hvu-r.1	123445275	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
bdi-r.1	100824679	uncharacterized LOC100824679
ath-u.5	AT1G24300	GYF domain-containing protein
ath-u.5	AT1G27430	GYF domain-containing protein
gma-u.5	100803441	uncharacterized LOC100803441
gma-u.5	100810477	uncharacterized LOC100810477
sly-u.5	101253285	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
sly-u.5	101248198	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
bra-r.6	103835407	uncharacterized LOC103835407
bra-r.6	103835408	uncharacterized LOC103835408
vvi-u.5	100256726	uncharacterized LOC100256726
vvi-u.5	100254102	uncharacterized LOC100254102
ppo-u.5	7495802	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
ppo-u.5	18107225	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
mtr-u.5	11439344	uncharacterized LOC11439344
ghi-r.1	107923982	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
ghi-r.1	121202951	uncharacterized LOC121202951
ghi-r.1	107923842	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
bna-r.1	106367900	uncharacterized LOC106367900
bna-r.1	106363487	uncharacterized LOC106363487
bna-r.1	106361895	uncharacterized LOC106361895
sot-r.1	102596709	uncharacterized LOC102596709
cit-r.1	102630310	uncharacterized LOC102630310
cit-r.1	102626123	protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
nta-r.1	142169448	uncharacterized LOC142169448
nta-r.1	107800880	uncharacterized LOC107800880
nta-r.1	107790743	uncharacterized LOC107790743

Top 50 coexpressed genes to 8079822 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8079822 (sbi-r.1 coexpression data)

CoexMap"8079822"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4172 genes)

IEA

Protein

XP_002459004.2 [sequence] [blastp]
XP_021312971.1 [sequence] [blastp]
XP_021312972.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, pero 1, cysk 1	(predict for XP_002459004.2)
nucl 9, pero 1, cysk 1	(predict for XP_021312971.1)
nucl 8, cyto 1, pero 1, cysk 1, cyto_pero 1	(predict for XP_021312972.1)

Subcellular
localization
TargetP

other 8	(predict for XP_002459004.2)
other 8	(predict for XP_021312971.1)
other 8	(predict for XP_021312972.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8079822	zma-u.5 for 100280040	zma-u.5 for 103636339	osa-u.5 for 4327226	tae-r.2 for 123080342	tae-r.2 for 123072056	tae-r.2 for 123063152	hvu-r.1 for 123445275	bdi-r.1 for 100824679	ath-u.5 for AT1G24300	ath-u.5 for AT1G27430	gma-u.5 for 100803441	gma-u.5 for 100810477	sly-u.5 for 101253285	sly-u.5 for 101248198	bra-r.6 for 103835407	bra-r.6 for 103835408	vvi-u.5 for 100256726	vvi-u.5 for 100254102	ppo-u.5 for 7495802	ppo-u.5 for 18107225	mtr-u.5 for 11439344	ghi-r.1 for 107923982	ghi-r.1 for 121202951	ghi-r.1 for 107923842	bna-r.1 for 106367900	bna-r.1 for 106363487	bna-r.1 for 106361895	sot-r.1 for 102596709	cit-r.1 for 102630310	cit-r.1 for 102626123	nta-r.1 for 142169448	nta-r.1 for 107800880	nta-r.1 for 107790743

Ortholog

Ortholog ID: 4823

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8079822

GYF domain-containing protein

protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1

uncharacterized LOC100824679

GYF domain-containing protein

uncharacterized LOC100803441

uncharacterized LOC100810477

protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like

uncharacterized LOC103835407

uncharacterized LOC103835408

uncharacterized LOC100256726

uncharacterized LOC100254102

protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1

uncharacterized LOC11439344

protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1

uncharacterized LOC121202951

uncharacterized LOC107911734

uncharacterized LOC106363487

uncharacterized LOC106361895

uncharacterized LOC106361894

uncharacterized LOC102596709

uncharacterized LOC102630310

protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like

uncharacterized LOC142169448

uncharacterized LOC107800880

uncharacterized LOC142169640

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	3
zma04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	5
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3
tae03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	3
bdi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	3
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4
ppo03083	Polycomb repressive complex	2
ppo03250	Viral life cycle - HIV-1	2
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2
nta03083	Polycomb repressive complex	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4

Expression

Expression pattern

Entrez Gene ID^*

8079822

100280040

103636339

4327226

123080342

123072056

123063152

123445275

100824679

839046

839633

100803441

100810477

101253285

101248198

103835407

103835408

100256726

100254102

7495802

18107225

11439344

107923982

121202951

107911734

106363487

106361895

106361894

102596709

102630310

102626123

142169448

107800880

142169640

The preparation time of this page was 0.2 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	2	1	3	1	1	2	2	2	2	2	2	1	3	3	1	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8079822 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8079822 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**