ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8081859	CASP-like protein 5A2
sbi-r.1	8067714	CASP-like protein 5A3
zma-u.5	103632043	CASP-like protein 5A2
zma-u.5	100276927	CASP-like protein 15
osa-u.5	4348363	CASP-like protein 5A2
osa-u.5	4331998	CASP-like protein 5A1
tae-r.2	123085013	CASP-like protein 5A1
tae-r.2	123093055	CASP-like protein 5A1
hvu-r.1	123449379	CASP-like protein 5A1
bdi-r.1	100822791	CASP-like protein 5A1
ath-u.5	AT2G28370	Uncharacterized protein family (UPF0497)
ath-u.5	AT2G37200	Uncharacterized protein family (UPF0497)
gma-u.5	100306043	uncharacterized LOC100306043
gma-u.5	100526963	MARVEL domain-containing protein
gma-u.5	100527764	uncharacterized LOC100527764
sly-u.5	101252735	CASP-like protein 5A1
sly-u.5	101260203	CASP-like protein 5A2
bra-r.6	103864883	CASP-like protein 5A2
bra-r.6	103867218	CASP-like protein 5A1
vvi-u.5	100256768	CASP-like protein 5A1
vvi-u.5	100254649	CASP-like protein 5A2
vvi-u.5	100265522	CASP-like protein 5A2
ppo-u.5	18098200	CASP-like protein 5A2
ppo-u.5	7491130	CASP-like protein 5A2
ppo-u.5	7486481	CASP-like protein 5A1
mtr-u.5	25492442	CASP-like protein 5A2
ghi-r.1	107906232	CASP-like protein 5A2
ghi-r.1	107913483	CASP-like protein 5A1
bna-r.1	106423085	CASP-like protein 5A1
bna-r.1	106352594	CASP-like protein 5A2
sot-r.1	102577653	uncharacterized LOC102577653
sot-r.1	102588297	CASP-like protein 5A2
cit-r.1	102624249	CASP-like protein 5A2
cit-r.1	102611299	CASP-like protein 5A1
nta-r.1	107759594	CASP-like protein 5A1
nta-r.1	107781993	CASP-like protein 5A1
nta-r.1	107794243	CASP-like protein 5A2

Top 50 coexpressed genes to 8081859 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8081859 (sbi-r.1 coexpression data)

CoexMap"8081859"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3172 genes)

IEA

GO MF

Protein

XP_002468310.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, vacu 3, E.R. 3, E.R._vacu 3, E.R._plas 3

(predict for XP_002468310.1)

Subcellular
localization
TargetP

other 6

(predict for XP_002468310.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8081859	sbi-r.1 for 8067714	zma-u.5 for 103632043	zma-u.5 for 100276927	osa-u.5 for 4348363	osa-u.5 for 4331998	tae-r.2 for 123085013	tae-r.2 for 123093055	hvu-r.1 for 123449379	bdi-r.1 for 100822791	ath-u.5 for AT2G28370	ath-u.5 for AT2G37200	gma-u.5 for 100306043	gma-u.5 for 100526963	gma-u.5 for 100527764	sly-u.5 for 101252735	sly-u.5 for 101260203	bra-r.6 for 103864883	bra-r.6 for 103867218	vvi-u.5 for 100256768	vvi-u.5 for 100254649	vvi-u.5 for 100265522	ppo-u.5 for 18098200	ppo-u.5 for 7491130	ppo-u.5 for 7486481	mtr-u.5 for 25492442	ghi-r.1 for 107906232	ghi-r.1 for 107913483	bna-r.1 for 106423085	bna-r.1 for 106352594	sot-r.1 for 102577653	sot-r.1 for 102588297	cit-r.1 for 102624249	cit-r.1 for 102611299	nta-r.1 for 107759594	nta-r.1 for 107781993	nta-r.1 for 107794243

Ortholog

Ortholog ID: 2987

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

CASP-like protein 5A2

CASP-like protein 5A3

CASP-like protein 5A2

CASP-like protein 15

CASP-like protein 5A2

CASP-like protein 5A1

Uncharacterized protein family (UPF0497)

uncharacterized LOC100306043

MARVEL domain-containing protein

uncharacterized LOC100527764

CASP-like protein 5A1

CASP-like protein 5A2

CASP-like protein 5A1

CASP-like protein 5A2

CASP-like protein 5A1

CASP-like protein 5A2

CASP-like protein 5A1

CASP-like protein 5A2

CASP-like protein 5A1

CASP-like protein 5A2

CASP-like protein 5A1

CASP-like protein 5A2

uncharacterized LOC102577653

CASP-like protein 5A2

CASP-like protein 5A1

CASP-like protein 5A2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2
zma03015	mRNA surveillance pathway	2
zma03040	Spliceosome	2
zma03010	Ribosome	2
zma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	5
gma00020	Citrate cycle (TCA cycle)	3
gma01200	Carbon metabolism	3
gma01240	Biosynthesis of cofactors	3
gma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	4
ppo04120	Ubiquitin mediated proteolysis	3
ppo04141	Protein processing in endoplasmic reticulum	2
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03083	Polycomb repressive complex	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00511	Other glycan degradation	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	7
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2
sot00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03083	Polycomb repressive complex	2
cit04120	Ubiquitin mediated proteolysis	2
cit04141	Protein processing in endoplasmic reticulum	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta03018	RNA degradation	3
nta04141	Protein processing in endoplasmic reticulum	3
nta03010	Ribosome	2
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta04145	Phagosome	2
nta04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta04136	Autophagy - other	4
nta04382	Cornified envelope formation	4
nta04144	Endocytosis	2
nta04145	Phagosome	2

Expression

Expression pattern

Entrez Gene ID^*

8081859

8067714

103632043

100276927

4348363

4331998

123085013

123093055

123449379

100822791

817385

818297

100306043

100526963

100527764

101252735

101260203

103864883

103867218

103829736

100256768

100254649

100265522

18098200

7491130

7486481

25492442

107913483

107940115

107948364

106423085

106357809

106446880

102577653

102588297

102624249

102611299

107781993

107794243

107822893

The preparation time of this page was 0.3 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	2	2	2	1	1	2	3	2	2	3	3	1	2	2	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8081859 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8081859 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**