Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8082662   nuclear cap-binding protein subunit 1 
 zma-u.5   100384700   nuclear cap-binding protein subunit 1 
 osa-u.5   4332822   nuclear cap-binding protein subunit 1-like 
 tae-r.2   123097487   nuclear cap-binding protein subunit 1 
 tae-r.2   123135686   nuclear cap-binding protein subunit 1 
 tae-r.2   123092050   nuclear cap-binding protein subunit 1 
 hvu-r.1   123448673   nuclear cap-binding protein subunit 1 
 bdi-r.1   100839026   nuclear cap-binding protein subunit 1 
 ath-u.5   ABH1   ARM repeat superfamily protein 
 gma-u.5   100811738   nuclear cap-binding protein subunit 1 
 gma-u.5   100791079   nuclear cap-binding protein subunit 1 
 sly-u.5   101249122   nuclear cap-binding protein subunit 1 
 bra-r.6   103860374   nuclear cap-binding protein subunit 1 
 vvi-u.5   100265341   nuclear cap-binding protein subunit 1 
 ppo-u.5   7482342   nuclear cap-binding protein subunit 1 
 mtr-u.5   11429115   nuclear cap-binding protein subunit 1 
 ghi-r.1   107945163   nuclear cap-binding protein subunit 1 
 ghi-r.1   107939466   nuclear cap-binding protein subunit 1 
 bna-r.1   106389405   nuclear cap-binding protein subunit 1 
 bna-r.1   106439757   nuclear cap-binding protein subunit 1-like 
 sot-r.1   102588913   nuclear cap-binding protein subunit 1 
 cit-r.1   102628799   nuclear cap-binding protein subunit 1 
 nta-r.1   107827611   nuclear cap-binding protein subunit 1 
 nta-r.1   107807683   nuclear cap-binding protein subunit 1 
 cre-r.1   CHLRE_12g524100v5   uncharacterized protein 

close


Top 50 coexpressed genes to 8082662 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8082662 (sbi-r.1 coexpression data)

CoexMap"8082662"


sbiLOC8082662 | Entrez gene ID : 8082662      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03013 [list] [network] Nucleocytoplasmic transport (112 genes)
sbi03015 [list] [network] mRNA surveillance pathway (120 genes)
sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (12 genes)  IEA  
GO:0006406 [list] [network] mRNA export from nucleus  (29 genes)  IEA  
GO CC
GO:0005846 [list] [network] nuclear cap binding complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0000339 [list] [network] RNA cap binding  (8 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002467864.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_002467864.2)
Subcellular
localization
TargetP
other 7,  mito 6  (predict for XP_002467864.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8082662
zma-u.5
for
100384700
osa-u.5
for
4332822
tae-r.2
for
123097487
tae-r.2
for
123135686
tae-r.2
for
123092050
hvu-r.1
for
123448673
bdi-r.1
for
100839026
ath-u.5
for
ABH1
gma-u.5
for
100811738
gma-u.5
for
100791079
sly-u.5
for
101249122
bra-r.6
for
103860374
vvi-u.5
for
100265341
ppo-u.5
for
7482342
mtr-u.5
for
11429115
ghi-r.1
for
107945163
ghi-r.1
for
107939466
bna-r.1
for
106389405
bna-r.1
for
106439757
sot-r.1
for
102588913
cit-r.1
for
102628799
nta-r.1
for
107827611
nta-r.1
for
107807683
cre-r.1
for
CHLRE_12g524100v5


Ortholog ID: 8870
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC8082662 LOC100384700 LOC4332822 LOC123097487 LOC123092050 LOC123085833 LOC123448673 LOC100839026 ABH1 LOC100811738 LOC100791079 LOC101249122 LOC103860374 LOC100265341 LOC7482342 LOC11429115 LOC107945163 LOC107939466 LOC106389405 LOC106439757 LOC102588913 LOC102628799 LOC107827611 LOC107807683 CHLRE_12g524100v5
Function* nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1-like nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 ARM repeat superfamily protein nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1-like nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma03040 Spliceosome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa00970 Aminoacyl-tRNA biosynthesis 5
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 7
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 4
tae00053 Ascorbate and aldarate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 6
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 6
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly03013 Nucleocytoplasmic transport 4
sly03018 RNA degradation 2
sly03020 RNA polymerase 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03040 Spliceosome 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03020 RNA polymerase 2
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna04120 Ubiquitin mediated proteolysis 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna04120 Ubiquitin mediated proteolysis 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 6
sot03015 mRNA surveillance pathway 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 3
cit00970 Aminoacyl-tRNA biosynthesis 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8082662 100384700 4332822 123097487 123092050 123085833 123448673 100839026 815840 100811738 100791079 101249122 103860374 100265341 7482342 11429115 107945163 107939466 106389405 106439757 102588913 102628799 107827611 107807683 5722525
The preparation time of this page was 0.8 [sec].