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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085226   pentatricopeptide repeat-containing protein At2g17033 
 zma-u.5   100194308   pentatricopeptide repeat smr4 
 osa-u.5   4328108   pentatricopeptide repeat-containing protein At2g17033 
 tae-r.2   123143416   pentatricopeptide repeat-containing protein At2g17033 
 tae-r.2   123135901   pentatricopeptide repeat-containing protein At2g17033 
 tae-r.2   123131910   pentatricopeptide repeat-containing protein At2g17033 
 hvu-r.1   123403407   pentatricopeptide repeat-containing protein At2g17033 
 bdi-r.1   104583410   pentatricopeptide repeat-containing protein At2g17033 
 ath-u.5   AT2G17033   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5   100805233   pentatricopeptide repeat-containing protein At2g17033 
 sly-u.5   101268811   pentatricopeptide repeat-containing protein At2g17033 
 bra-r.6   103860502   pentatricopeptide repeat-containing protein At2g17033 
 vvi-u.5   100250254   pentatricopeptide repeat-containing protein At2g17033 
 ppo-u.5   7474981   pentatricopeptide repeat-containing protein At2g17033 
 mtr-u.5   11446726   pentatricopeptide repeat-containing protein At2g17033 
 ghi-r.1   107927809   pentatricopeptide repeat-containing protein At2g17033 
 ghi-r.1   107908636   pentatricopeptide repeat-containing protein At2g17033 
 bna-r.1   106389465   pentatricopeptide repeat-containing protein At2g17033 
 bna-r.1   106439821   pentatricopeptide repeat-containing protein At2g17033 
 sot-r.1   102588840   pentatricopeptide repeat-containing protein At2g17033 
 cit-r.1   102612591   pentatricopeptide repeat-containing protein At2g17033 
 nta-r.1   107819748   pentatricopeptide repeat-containing protein At2g17033-like 
 nta-r.1   107790855   pentatricopeptide repeat-containing protein At2g17033 

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Top 50 coexpressed genes to 8085226 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085226 (sbi-r.1 coexpression data)

CoexMap"8085226"


sbiLOC8085226 | Entrez gene ID : 8085226      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002453199.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  pero 1,  nucl_plas 1,  mito_plas 1  (predict for XP_002453199.2)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_002453199.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085226
zma-u.5
for
100194308
osa-u.5
for
4328108
tae-r.2
for
123143416
tae-r.2
for
123135901
tae-r.2
for
123131910
hvu-r.1
for
123403407
bdi-r.1
for
104583410
ath-u.5
for
AT2G17033
gma-u.5
for
100805233
sly-u.5
for
101268811
bra-r.6
for
103860502
vvi-u.5
for
100250254
ppo-u.5
for
7474981
mtr-u.5
for
11446726
ghi-r.1
for
107927809
ghi-r.1
for
107908636
bna-r.1
for
106389465
bna-r.1
for
106439821
sot-r.1
for
102588840
cit-r.1
for
102612591
nta-r.1
for
107819748
nta-r.1
for
107790855


Ortholog ID: 11237
Species sbi zma osa tae tae tae hvu bdi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC8085226 LOC100194308 LOC4328108 LOC123143416 LOC123135901 LOC123131910 LOC123403407 LOC104583410 AT2G17033 LOC100805233 LOC101268811 LOC103860502 LOC100250254 LOC7474981 LOC11446726 LOC107927809 LOC107908636 LOC106389465 LOC106439821 LOC102588840 LOC102612591 LOC107819748 LOC107790855
Function* pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat smr4 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033 pentatricopeptide repeat-containing protein At2g17033-like pentatricopeptide repeat-containing protein At2g17033
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00860 Porphyrin metabolism 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae00860 Porphyrin metabolism 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
bna01240 Biosynthesis of cofactors 5
bna04016 MAPK signaling pathway - plant 2
bna00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna04016 MAPK signaling pathway - plant 2
bna00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8085226 100194308 4328108 123143416 123135901 123131910 123403407 104583410 816207 100805233 101268811 103860502 100250254 7474981 11446726 107927809 107908636 106389465 106439821 102588840 102612591 107819748 107790855
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