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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085422   zinc finger HIT domain-containing protein 3 
 zma-u.5   100500952   HIT-type Zinc finger family protein 
 osa-u.5   4327428   uncharacterized LOC4327428 
 tae-r.2   123079635   zinc finger HIT domain-containing protein 3 
 tae-r.2   123071290   zinc finger HIT domain-containing protein 3 
 hvu-r.1   123444987   zinc finger HIT domain-containing protein 3 
 bdi-r.1   100824889   zinc finger HIT domain-containing protein 3 
 ath-u.5   AT4G28820   HIT-type Zinc finger family protein 
 gma-u.5   100801915   zinc finger HIT domain-containing protein 3 
 gma-u.5   100527614   zinc finger HIT domain-containing protein 
 sly-u.5   ZNHIT   zinc finger HIT-type containing protein 
 bra-r.6   103854107   zinc finger HIT domain-containing protein 3 
 ppo-u.5   7459524   uncharacterized LOC7459524 
 mtr-u.5   25484154   zinc finger HIT domain-containing protein 3 
 ghi-r.1   121219938   zinc finger HIT domain-containing protein 3 
 ghi-r.1   107942551   zinc finger HIT domain-containing protein 3 
 ghi-r.1   107932438   uncharacterized LOC107932438 
 sot-r.1   102582946   zinc finger HIT domain-containing protein 3 
 cit-r.1   102622371   uncharacterized LOC102622371 
 nta-r.1   107817311   uncharacterized LOC107817311 
 nta-r.1   142171507   uncharacterized LOC142171507 
 cre-r.1   CHLRE_13g602600v5   uncharacterized protein 

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Top 50 coexpressed genes to 8085422 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085422 (sbi-r.1 coexpression data)

CoexMap"8085422"


sbiLOC8085422 | Entrez gene ID : 8085422      
Species sbi zma osa tae hvu bdi ath gma sly bra ppo mtr ghi sot cit nta cre bna vvi
Paralog 1 1 1 2 1 1 1 2 1 1 1 1 3 1 1 2 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048254 [list] [network] snoRNA localization  (2 genes)  IEA  
GO:0000492 [list] [network] box C/D snoRNP assembly  (7 genes)  IEA  
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (20 genes)  IEA  
GO CC
GO:0070761 [list] [network] pre-snoRNP complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
Protein XP_002458710.1 [sequence] [blastp]
XP_021311032.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto_nucl 2,  nucl 1,  cyto 1,  mito 1  (predict for XP_002458710.1)
chlo 4,  cyto_nucl 2,  nucl 1,  cyto 1,  mito 1  (predict for XP_021311032.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_002458710.1)
other 5,  chlo 3  (predict for XP_021311032.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085422
zma-u.5
for
100500952
osa-u.5
for
4327428
tae-r.2
for
123079635
tae-r.2
for
123071290
hvu-r.1
for
123444987
bdi-r.1
for
100824889
ath-u.5
for
AT4G28820
gma-u.5
for
100801915
gma-u.5
for
100527614
sly-u.5
for
ZNHIT
bra-r.6
for
103854107
ppo-u.5
for
7459524
mtr-u.5
for
25484154
ghi-r.1
for
121219938
ghi-r.1
for
107942551
ghi-r.1
for
107932438
sot-r.1
for
102582946
cit-r.1
for
102622371
nta-r.1
for
107817311
nta-r.1
for
142171507
cre-r.1
for
CHLRE_13g602600v5


Ortholog ID: 8106
Species sbi zma osa tae tae hvu bdi ath gma gma sly bra ppo mtr ghi ghi ghi sot cit nta nta cre
Symbol LOC8085422 LOC100500952 LOC4327428 LOC123079635 LOC123071290 LOC123444987 LOC100824889 AT4G28820 LOC100801915 LOC100527614 ZNHIT LOC103854107 LOC7459524 LOC25484154 LOC121219938 LOC107942551 LOC107932438 LOC102582946 LOC102622371 LOC107817311 LOC142171507 CHLRE_13g602600v5
Function* zinc finger HIT domain-containing protein 3 HIT-type Zinc finger family protein uncharacterized LOC4327428 zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 HIT-type Zinc finger family protein zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein zinc finger HIT-type containing protein zinc finger HIT domain-containing protein 3 uncharacterized LOC7459524 zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 uncharacterized LOC107932438 zinc finger HIT domain-containing protein 3 uncharacterized LOC102622371 uncharacterized LOC107817311 uncharacterized LOC142171507 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00061 Fatty acid biosynthesis 2
osa00062 Fatty acid elongation 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03010 Ribosome 3
gma01232 Nucleotide metabolism 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 2
bra00261 Monobactam biosynthesis 2
bra00270 Cysteine and methionine metabolism 2
bra00300 Lysine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8085422 100500952 4327428 123079635 123071290 123444987 100824889 829003 100801915 100527614 101259844 103854107 7459524 25484154 121219938 107942551 107932438 102582946 102622371 107817311 142171507 66056097
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