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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085861   pentatricopeptide repeat-containing protein At1g62590 
 sbi-r.1   8084989   pentatricopeptide repeat-containing protein At1g09900 
 sbi-r.1   110434612   uncharacterized LOC110434612 
 zma-u.5   100281543   uncharacterized LOC100281543 
 zma-u.5   100381719   uncharacterized LOC100381719 
 zma-u.5   103646123   pentatricopeptide repeat-containing protein At3g22470, mitochondrial 
 osa-u.5   4329167   pentatricopeptide repeat-containing protein At1g09900 
 osa-u.5   4337390   protein Rf1, mitochondrial 
 osa-u.5   9267318   protein Rf1, mitochondrial 
 tae-r.2   123114750   pentatricopeptide repeat-containing protein At1g09900 
 hvu-r.1   123426842   pentatricopeptide repeat-containing protein At1g09900-like 
 hvu-r.1   123428902   pentatricopeptide repeat-containing protein At1g63400-like 
 bdi-r.1   100837029   pentatricopeptide repeat-containing protein At1g12300, mitochondrial 
 bdi-r.1   100843562   pentatricopeptide repeat-containing protein At5g64320, mitochondrial 
 bdi-r.1   100826335   pentatricopeptide repeat-containing protein At1g09900 

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Top 50 coexpressed genes to 8085861 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085861 (sbi-r.1 coexpression data)

CoexMap"8085861"


sbiLOC8085861 | Entrez gene ID : 8085861    
Species sbi zma osa tae hvu bdi cre vvi bra ath ppo mtr nta bna gma cit sly ghi sot
Paralog 3 3 3 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002448766.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002448766.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002448766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085861
sbi-r.1
for
8084989
sbi-r.1
for
110434612
zma-u.5
for
100281543
zma-u.5
for
100381719
zma-u.5
for
103646123
osa-u.5
for
4329167
osa-u.5
for
4337390
osa-u.5
for
9267318
tae-r.2
for
123114750
hvu-r.1
for
123426842
hvu-r.1
for
123428902
bdi-r.1
for
100837029
bdi-r.1
for
100843562
bdi-r.1
for
100826335


Ortholog ID: 9913
Species sbi sbi zma zma zma osa osa osa tae hvu hvu bdi bdi bdi
Symbol LOC8085861 LOC110434612 LOC100281543 LOC100381719 LOC103646123 LOC4329167 LOC4337390 LOC9267318 LOC123055192 LOC123426842 LOC123428902 LOC100837029 LOC100843562 LOC100826335
Function* pentatricopeptide repeat-containing protein At1g62590 uncharacterized LOC110434612 uncharacterized LOC100281543 uncharacterized LOC100381719 pentatricopeptide repeat-containing protein At3g22470, mitochondrial pentatricopeptide repeat-containing protein At1g09900 protein Rf1, mitochondrial protein Rf1, mitochondrial pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g63400-like pentatricopeptide repeat-containing protein At1g12300, mitochondrial pentatricopeptide repeat-containing protein At5g64320, mitochondrial pentatricopeptide repeat-containing protein At1g09900
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 4
sbi01200 Carbon metabolism 4
sbi01240 Biosynthesis of cofactors 3
sbi00061 Fatty acid biosynthesis 3
sbi01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8085861 110434612 100281543 100381719 103646123 4329167 4337390 9267318 123055192 123426842 123428902 100837029 100843562 100826335
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