ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8086353	protein HASTY 1
zma-u.5	103635172	protein HASTY 1
osa-u.5	4325820	protein HASTY 1
osa-u.5	9269845	protein HASTY 1-like
tae-r.2	123061258	protein HASTY 1
tae-r.2	123069869	protein HASTY 1
tae-r.2	123078365	protein HASTY 1
hvu-r.1	123443675	protein HASTY 1
bdi-r.1	100833381	protein HASTY 1
ath-u.5	HST	ARM repeat superfamily protein
gma-u.5	102661011	protein HASTY 1
gma-u.5	100790207	protein HASTY 1
gma-u.5	100789688	protein HASTY 1
sly-u.5	101250741	protein HASTY 1
bra-r.6	103874554	protein HASTY 1
bra-r.6	103850025	protein HASTY 1
vvi-u.5	100258918	protein HASTY 1
ppo-u.5	7473907	protein HASTY 1
mtr-u.5	11429604	protein HASTY 1
mtr-u.5	25483955	protein HASTY 1
ghi-r.1	107920533	protein HASTY 1
ghi-r.1	107893603	protein HASTY 1
ghi-r.1	107893251	protein HASTY 1
bna-r.1	106348657	protein HASTY 1-like
bna-r.1	106445262	protein HASTY 1-like
bna-r.1	106433386	protein HASTY 1
sot-r.1	102582390	protein HASTY 1
cit-r.1	102625247	protein HASTY 1
nta-r.1	107830040	protein HASTY 1
nta-r.1	107767613	protein HASTY 1
cre-r.1	CHLRE_10g420250v5	uncharacterized protein
cre-r.1	CHLRE_10g420400v5	uncharacterized protein

Annotation

functional annotation

KEGG

sbi03013 [list] [network] Nucleocytoplasmic transport (112 genes)

GO BP

GO:0006611 [list] [network] protein export from nucleus	(10 genes)	IEA
GO:0006405 [list] [network] RNA export from nucleus	(43 genes)	IEA

GO CC

GO:0042565 [list] [network] RNA nuclear export complex	(1 genes)	IEA
GO:0005634 [list] [network] nucleus	(2977 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4816 genes)	IEA

GO MF

GO:0005049 [list] [network] nuclear export signal receptor activity	(10 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1243 genes)	IEA

Protein

XP_002457828.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 2, cyto 1, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1, cyto_plas 1

(predict for XP_002457828.1)

Subcellular
localization
TargetP

chlo 5

(predict for XP_002457828.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8086353	zma-u.5 for 103635172	osa-u.5 for 4325820	osa-u.5 for 9269845	tae-r.2 for 123061258	tae-r.2 for 123069869	tae-r.2 for 123078365	hvu-r.1 for 123443675	bdi-r.1 for 100833381	ath-u.5 for HST	gma-u.5 for 102661011	gma-u.5 for 100790207	gma-u.5 for 100789688	sly-u.5 for 101250741	bra-r.6 for 103874554	bra-r.6 for 103850025	vvi-u.5 for 100258918	ppo-u.5 for 7473907	mtr-u.5 for 11429604	mtr-u.5 for 25483955	ghi-r.1 for 107920533	ghi-r.1 for 107893603	ghi-r.1 for 107893251	bna-r.1 for 106348657	bna-r.1 for 106445262	bna-r.1 for 106433386	sot-r.1 for 102582390	cit-r.1 for 102625247	nta-r.1 for 107830040	nta-r.1 for 107767613	cre-r.1 for CHLRE_10g420250v5	cre-r.1 for CHLRE_10g420400v5

Ortholog

Ortholog ID: 5719

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

HST

Function^*

protein HASTY 1

protein HASTY 1-like

protein HASTY 1

ARM repeat superfamily protein

protein HASTY 1

protein HASTY 1-like

protein HASTY 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2
sbi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	6
zma03018	RNA degradation	3
zma03015	mRNA surveillance pathway	2
zma03083	Polycomb repressive complex	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	7
tae03082	ATP-dependent chromatin remodeling	3
tae03018	RNA degradation	3
tae03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	5
tae03018	RNA degradation	2
tae03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03082	ATP-dependent chromatin remodeling	2
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	3
hvu03015	mRNA surveillance pathway	3
hvu03013	Nucleocytoplasmic transport	3
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	5
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	3
gma04141	Protein processing in endoplasmic reticulum	3
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	6
sly04120	Ubiquitin mediated proteolysis	3
sly03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	3
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	6
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	7
mtr03018	RNA degradation	2
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00270	Cysteine and methionine metabolism	3
ghi00920	Sulfur metabolism	3
ghi01200	Carbon metabolism	3
ghi01230	Biosynthesis of amino acids	3
ghi01320	Sulfur cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	4
ghi03013	Nucleocytoplasmic transport	3
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	8
bna03008	Ribosome biogenesis in eukaryotes	6
bna03250	Viral life cycle - HIV-1	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	8
bna03008	Ribosome biogenesis in eukaryotes	6
bna03250	Viral life cycle - HIV-1	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00860	Porphyrin metabolism	3
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

8086353

103635172

4325820

9269845

123061258

123069869

123078365

123443675

100833381

819666

102661011

100790207

100789688

101250741

103874554

103850025

100258918

7473907

11429604

25483955

107920533

107893603

107893251

106348657

106433386

106382236

102582390

102625247

107830040

107767613

5728290

66054943

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8086353 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8086353 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	1	2	3	1	1	1	3	1	2	1	1	2	3	3	1	1	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8086353 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8086353 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**