ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102581020	protein FAF-like, chloroplastic
sot-r.1	107059097	protein FAF-like, chloroplastic
sot-r.1	107059098	protein FAF-like, chloroplastic
sot-r.1	102594496	protein FAF-like, chloroplastic
sly-u.5	101262990	FAF domain-containing protein CSR
sly-u.5	101261718	protein FAF-like, chloroplastic
nta-r.1	107813602	protein FAF-like, chloroplastic
nta-r.1	107787683	uncharacterized LOC107787683
nta-r.1	107793717	protein FAF-like, chloroplastic
ath-u.5	AT5G22090	FAF-like protein (DUF3049)
gma-u.5	112998576	protein FAF-like, chloroplastic
gma-u.5	100809151	protein FAF-like, chloroplastic
gma-u.5	100787948	protein FAF-like, chloroplastic
bra-r.6	103851422	protein FAF-like, chloroplastic
bra-r.6	103856499	protein FAF-like, chloroplastic
bra-r.6	103845573	protein FAF-like, chloroplastic
vvi-u.5	100249672	protein FAF-like, chloroplastic
ppo-u.5	7491117	protein FAF-like, chloroplastic
ppo-u.5	7475136	protein FAF-like, chloroplastic
mtr-u.5	11411406	protein FAF-like, chloroplastic
mtr-u.5	11427218	protein FAF-like, chloroplastic
mtr-u.5	11417058	protein FAF-like, chloroplastic
ghi-r.1	121219435	protein FAF-like, chloroplastic
ghi-r.1	107953152	protein FAF-like, chloroplastic
ghi-r.1	107906667	protein FAF-like, chloroplastic
bna-r.1	106386954	protein FAF-like, chloroplastic
bna-r.1	106371665	protein FAF-like, chloroplastic
bna-r.1	106419747	protein FAF-like, chloroplastic
cit-r.1	112499380	protein FAF-like, chloroplastic
osa-u.5	4332321	protein FAF-like, chloroplastic
osa-u.5	4333855	protein FAF-like, chloroplastic
osa-u.5	9269128	uncharacterized LOC9269128
zma-u.5	103639336	protein FANTASTIC FOUR 4
zma-u.5	103625961	protein FAF-like, chloroplastic
zma-u.5	103643873	protein FAF-like, chloroplastic
tae-r.2	123097993	uncharacterized LOC123097993
tae-r.2	123092693	protein FAF-like, chloroplastic
tae-r.2	123082372	protein FAF-like, chloroplastic
hvu-r.1	123452552	protein FAF-like, chloroplastic
hvu-r.1	123449099	protein FANTASTIC FOUR 1-like
hvu-r.1	123451042	protein FAF-like, chloroplastic
sbi-r.1	8054303	protein FANTASTIC FOUR 3
sbi-r.1	8063405	protein FAF-like, chloroplastic
bdi-r.1	100838854	protein FAF-like, chloroplastic
bdi-r.1	100826694	protein FAF-like, chloroplastic

Top 50 coexpressed genes to 102581020 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102581020 (sot-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

protein FAF-like, chloroplastic

KEGG

GO BP

GO CC

GO MF

Protein

XP_006361108.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 4

(predict for XP_006361108.1)

Subcellular
localization
TargetP

other 7

(predict for XP_006361108.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102581020	sot-r.1 for 107059097	sot-r.1 for 107059098	sot-r.1 for 102594496	sly-u.5 for 101262990	sly-u.5 for 101261718	nta-r.1 for 107813602	nta-r.1 for 107787683	nta-r.1 for 107793717	ath-u.5 for AT5G22090	gma-u.5 for 112998576	gma-u.5 for 100809151	gma-u.5 for 100787948	bra-r.6 for 103851422	bra-r.6 for 103856499	bra-r.6 for 103845573	vvi-u.5 for 100249672	ppo-u.5 for 7491117	ppo-u.5 for 7475136	mtr-u.5 for 11411406	mtr-u.5 for 11427218	mtr-u.5 for 11417058	ghi-r.1 for 121219435	ghi-r.1 for 107953152	ghi-r.1 for 107906667	bna-r.1 for 106386954	bna-r.1 for 106371665	bna-r.1 for 106419747	cit-r.1 for 112499380	osa-u.5 for 4332321	osa-u.5 for 4333855	osa-u.5 for 9269128	zma-u.5 for 103639336	zma-u.5 for 103625961	zma-u.5 for 103643873	tae-r.2 for 123097993	tae-r.2 for 123092693	tae-r.2 for 123082372	hvu-r.1 for 123452552	hvu-r.1 for 123449099	hvu-r.1 for 123451042	sbi-r.1 for 8054303	sbi-r.1 for 8063405	bdi-r.1 for 100838854	bdi-r.1 for 100826694

Please wait a moment.

Ortholog

Ortholog ID: 2296

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

protein FAF-like, chloroplastic

FAF domain-containing protein CSR

protein FAF-like, chloroplastic

FAF-like protein (DUF3049)

protein FAF-like, chloroplastic

uncharacterized LOC9269128

protein FANTASTIC FOUR 4

protein FAF-like, chloroplastic

uncharacterized LOC123085349

protein FAF-like, chloroplastic

protein FANTASTIC FOUR 1-like

protein FAF-like, chloroplastic

protein FANTASTIC FOUR 3

protein FAF-like, chloroplastic

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03083	Polycomb repressive complex	2
sly04120	Ubiquitin mediated proteolysis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3
nta03083	Polycomb repressive complex	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	3
osa00010	Glycolysis / Gluconeogenesis	3
osa01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

102581020

107059097

107059098

101262990

107793717

107832177

142173822

832270

112998576

100809151

100790085

103851422

103856499

103845573

100249672

7491117

7475136

11411406

11427218

11439875

107953152

107906667

107889226

106386954

106371665

106419747

112499380

4332321

4333855

9269128

103639336

103643873

103634046

123085349

123095829

123452552

123449099

123451042

8054303

8063405

100838854

100826694

The preparation time of this page was 0.3 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	1	3	3	1	2	3	3	3	1	3	3	3	3	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102581020 (sot-r.1 coexpression data)

Top 50 enrichment test to 102581020 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**