ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102586960	uncharacterized LOC102586960
sot-r.1	102586151	neurofilament medium polypeptide-like
sot-r.1	102594870	neurofilament medium polypeptide
sot-r.1	102598845	translation initiation factor IF-2-like
sly-u.5	101263714	heavy metal-associated isoprenylated plant protein 7
sly-u.5	101264884	heavy metal-associated isoprenylated plant protein 7-like
sly-u.5	101258837	heavy metal-associated isoprenylated plant protein 7
nta-r.1	107760329	heavy metal-associated isoprenylated plant protein 7-like
nta-r.1	107812849	heavy metal-associated isoprenylated plant protein 7
nta-r.1	107814707	heavy metal-associated isoprenylated plant protein 7-like
ath-u.5	AT5G50740	Heavy metal transport/detoxification superfamily protein
ath-u.5	FP3	farnesylated protein 3
gma-u.5	100814726	heavy-metal-associated domain-containing protein
gma-u.5	100808454	uncharacterized LOC100808454
gma-u.5	100807490	heavy metal-associated isoprenylated plant protein 7
bra-r.6	103857273	heavy metal-associated isoprenylated plant protein 7
bra-r.6	103855053	heavy metal-associated isoprenylated plant protein 7
bra-r.6	103873765	heavy metal-associated isoprenylated plant protein 7
vvi-u.5	100257542	heavy metal-associated isoprenylated plant protein 7
vvi-u.5	100249014	heavy metal-associated isoprenylated plant protein 7
ppo-u.5	7482640	heavy metal-associated isoprenylated plant protein 7
ppo-u.5	7454737	heavy metal-associated isoprenylated plant protein 7
ppo-u.5	7463653	heavy metal-associated isoprenylated plant protein 7
mtr-u.5	11419966	heavy metal-associated isoprenylated plant protein 7
mtr-u.5	11424388	heavy metal-associated isoprenylated plant protein 7
ghi-r.1	107944703	heavy metal-associated isoprenylated plant protein 7
ghi-r.1	107907398	heavy metal-associated isoprenylated plant protein 7
ghi-r.1	107913434	heavy metal-associated isoprenylated plant protein 7
bna-r.1	106405253	heavy metal-associated isoprenylated plant protein 7
bna-r.1	125605795	heavy metal-associated isoprenylated plant protein 7-like
bna-r.1	125598038	heavy metal-associated isoprenylated plant protein 7-like
cit-r.1	102612914	heavy metal-associated isoprenylated plant protein 7
cit-r.1	102622829	heavy metal-associated isoprenylated plant protein 7
osa-u.5	9272556	heavy metal-associated isoprenylated plant protein 7
osa-u.5	4329453	heavy metal-associated isoprenylated plant protein 7
osa-u.5	4348282	heavy metal-associated isoprenylated plant protein 7
zma-u.5	100285383	uncharacterized LOC100285383
zma-u.5	103641584	farnesylated protein 3
zma-u.5	100304361	farnesylated protein 3
tae-r.2	123189064	heavy metal-associated isoprenylated plant protein 7
hvu-r.1	123426551	heavy metal-associated isoprenylated plant protein 7
sbi-r.1	8056086	heavy metal-associated isoprenylated plant protein 7
sbi-r.1	8070971	heavy metal-associated isoprenylated plant protein 7
bdi-r.1	100839569	heavy metal-associated isoprenylated plant protein 7
bdi-r.1	100829420	heavy metal-associated isoprenylated plant protein 7

Top 50 coexpressed genes to 102586960 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102586960 (sot-r.1 coexpression data)

CoexMap"102586960"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046872 [list] [network] metal ion binding

(2103 genes)

IEA

Protein

XP_006352326.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 3, extr 3, nucl 1, mito 1

(predict for XP_006352326.2)

Subcellular
localization
TargetP

other 9

(predict for XP_006352326.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102586960	sot-r.1 for 102586151	sot-r.1 for 102594870	sot-r.1 for 102598845	sly-u.5 for 101263714	sly-u.5 for 101264884	sly-u.5 for 101258837	nta-r.1 for 107760329	nta-r.1 for 107812849	nta-r.1 for 107814707	ath-u.5 for AT5G50740	ath-u.5 for FP3	gma-u.5 for 100814726	gma-u.5 for 100808454	gma-u.5 for 100807490	bra-r.6 for 103857273	bra-r.6 for 103855053	bra-r.6 for 103873765	vvi-u.5 for 100257542	vvi-u.5 for 100249014	ppo-u.5 for 7482640	ppo-u.5 for 7454737	ppo-u.5 for 7463653	mtr-u.5 for 11419966	mtr-u.5 for 11424388	ghi-r.1 for 107944703	ghi-r.1 for 107907398	ghi-r.1 for 107913434	bna-r.1 for 106405253	bna-r.1 for 125605795	bna-r.1 for 125598038	cit-r.1 for 102612914	cit-r.1 for 102622829	osa-u.5 for 9272556	osa-u.5 for 4329453	osa-u.5 for 4348282	zma-u.5 for 100285383	zma-u.5 for 103641584	zma-u.5 for 100304361	tae-r.2 for 123189064	hvu-r.1 for 123426551	sbi-r.1 for 8056086	sbi-r.1 for 8070971	bdi-r.1 for 100839569	bdi-r.1 for 100829420

Ortholog

Ortholog ID: 1520

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

FP3

Function^*

uncharacterized LOC102586960

neurofilament medium polypeptide-like

neurofilament medium polypeptide

heavy metal-associated isoprenylated plant protein 7

heavy metal-associated isoprenylated plant protein 7-like

heavy metal-associated isoprenylated plant protein 7

Heavy metal transport/detoxification superfamily protein

farnesylated protein 3

uncharacterized LOC100808454

heavy metal-associated isoprenylated plant protein 7

uncharacterized LOC100285383

farnesylated protein 3

heavy metal-associated isoprenylated plant protein 7

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot04130	SNARE interactions in vesicular transport	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	4
sly04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2
cit00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00062	Fatty acid elongation	3
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00710	Carbon fixation by Calvin cycle	4
zma01200	Carbon metabolism	4
zma00010	Glycolysis / Gluconeogenesis	3
zma00620	Pyruvate metabolism	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04145	Phagosome	3
zma04517	IgSF CAM signaling	3
zma04814	Motor proteins	3
zma00010	Glycolysis / Gluconeogenesis	2
zma00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	9
tae00460	Cyanoamino acid metabolism	6
tae00999	Biosynthesis of various plant secondary metabolites	6
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	5
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00230	Purine metabolism	2
bdi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

102586960

102586151

102594870

101263714

101258837

101257650

107817218

107759893

107763233

835146

836472

100808454

100807490

100776967

103857273

103855053

103837475

100257542

100249014

7482640

7454737

11419966

11424388

25502009

107907398

107960155

107963725

106382905

106348339

106387515

102612914

102622829

9272556

4329453

4348282

100285383

103641584

100304361

123189064

123053149

123426551

8056086

8070971

100839569

100829420

The preparation time of this page was 0.4 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	2	3	3	2	3	2	3	3	2	3	3	1	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102586960 (sot-r.1 coexpression data)

Top 50 enrichment test to 102586960 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**