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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102589653   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 sly-u.5   101256833   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 nta-r.1   107797813   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 nta-r.1   107807608   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like 
 ath-u.5   FTSH12   FTSH protease 12 
 gma-u.5   100819005   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 bra-r.6   103830476   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 vvi-u.5   100244978   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 ppo-u.5   18102652   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 mtr-u.5   11407282   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 ghi-r.1   107895151   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 ghi-r.1   107919911   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 bna-r.1   106353400   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like 
 bna-r.1   106405638   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 cit-r.1   102626777   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 

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Top 50 coexpressed genes to 102589653 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102589653 (sot-r.1 coexpression data)

CoexMap"102589653"


sotLOC102589653 | Entrez gene ID : 102589653    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit sbi osa tae hvu zma cre bdi
Paralog 1 1 2 1 1 1 1 1 1 2 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034982 [list] [network] mitochondrial protein processing  (8 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (23 genes)  IEA  
GO CC
GO:0005745 [list] [network] m-AAA complex  (4 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (97 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (34 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (54 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (431 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2117 genes)  IEA  
Protein XP_006347120.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 9,  chlo 1,  pero 1  (predict for XP_006347120.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006347120.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102589653
sly-u.5
for
101256833
nta-r.1
for
107797813
nta-r.1
for
107807608
ath-u.5
for
FTSH12
gma-u.5
for
100819005
bra-r.6
for
103830476
vvi-u.5
for
100244978
ppo-u.5
for
18102652
mtr-u.5
for
11407282
ghi-r.1
for
107895151
ghi-r.1
for
107919911
bna-r.1
for
106353400
bna-r.1
for
106405638
cit-r.1
for
102626777


Ortholog ID: 13489
Species sot sly nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit
Symbol LOC102589653 LOC101256833 LOC107797813 LOC107807608 FTSH12 LOC100819005 LOC103830476 LOC100244978 LOC18102652 LOC11407282 LOC107895151 LOC107919911 LOC106353400 LOC106405638 LOC102626777
Function* ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like FTSH protease 12 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00260 Glycine, serine and threonine metabolism 2
nta00261 Monobactam biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102589653 101256833 107797813 107807608 844294 100819005 103830476 100244978 18102652 11407282 107895151 107919911 106353400 106405638 102626777
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